ENSGALG00000011499


Gallus gallus

Features
Gene ID: ENSGALG00000011499
  
Biological name :SCARB2
  
Synonyms : SCARB2 / scavenger receptor class B member 2
  
Possible biological names infered from orthology : Lysosome membrane protein 2 / O35114 / Q14108
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 50249539
Gene end: 50270243
  
Corresponding Affymetrix probe sets: Gga.5283.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018715
Ensembl peptide - ENSGALP00000050114
NCBI entrez gene - 422638     See in Manteia.
RefSeq - XM_420593
swissprot - A0A1D5PBI6
swissprot - E1BRR6
Ensembl - ENSGALG00000011499
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scarb2cENSDARG00000089844Danio rerio
 Q14108ENSG00000138760Homo sapiens
 O35114ENSMUSG00000029426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CD36 / platelet glycoprotein 4 / P16671* / Q08857* / CD36 molecule*ENSGALG0000000843933
SCARB1 / scavenger receptor class B member 1 / Q61009* / Q8WTV0*ENSGALG0000004622631


Protein motifs (from Interpro)
Interpro ID Name
 IPR002159  CD36 family
 IPR005429  Lysosome membrane protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001508 action potential IEA
 biological_processGO:0006622 protein targeting to lysosome IEA
 biological_processGO:1905123 regulation of glucosylceramidase activity IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043202 lysosomal lumen IEA
 molecular_functionGO:0019899 enzyme binding IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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