ENSDARG00000096908


Danio rerio

Features
Gene ID: ENSDARG00000096908
  
Biological name :si:ch73-185c24.2
  
Synonyms : si:ch73-185c24.2
  
Possible biological names infered from orthology : leucine rich repeat containing 19 / Leucine-rich repeat-containing protein 19 / LRRC19 / Q8BZT5 / Q9H756
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 34028532
Gene end: 34036231
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128409
NCBI entrez gene - 794764     See in Manteia.
swissprot - X1WDW0
ZFIN ID - ZDB-GENE-131121-189
Ensembl - ENSDARG00000096908
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC19ENSGALG00000045028Gallus gallus
 LRRC19ENSG00000184434Homo sapiens
 Lrrc19ENSMUSG00000049799Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slitrk2 / SLIT and NTRK-like family, member 2 / O96002* / Q810C0* / Q9H156*ENSDARG0000000663615
slitrk5a / SLIT and NTRK-like family, member 5a / O94991* / SLITRK5* / SLIT and NTRK like family member 5*ENSDARG0000010335915
slitrk4 / SLIT and NTRK-like family, member 4 / Q810B8* / Q8IW52*ENSDARG0000007978115
slitrk5b / SLIT and NTRK-like family, member 5b / Q810B7* / O94991* / SLITRK5* / SLIT and NTRK-like protein 5 * / SLIT and NTRK like family member 5*ENSDARG0000007415315
slitrk3a / SLIT and NTRK-like family, member 3a / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007812314
slitrk3b / SLIT and NTRK-like family, member 3b / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007473914
slitrk6 / SLIT and NTRK-like family, member 6 / Q9H5Y7*ENSDARG0000009876913
elfn1b / extracellular leucine-rich repeat and fibronectin type III domain containing 1b / ELFN1* / P0C7U0* / Q8C8T7* / Protein ELFN1 * / extracellular leucine rich repeat and fibronectin t...ENSDARG0000007437212
CR847537.1 / ELFN2* / Q5R3F8* / extracellular leucine rich repeat and fibronectin type III domain containing 2*ENSDARG0000011087411
elfn2a / extracellular leucine-rich repeat and fibronectin type III domain containing 2a / ELFN2* / Q5R3F8* / Q68FM6* / extracellular leucine rich repeat and fibronectin type III domain con...ENSDARG0000007760910


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR032675  Leucine-rich repeat domain superfamily
 IPR033604  Type III endosome membrane protein TEMP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr