ENSDARG00000006636


Danio rerio

Features
Gene ID: ENSDARG00000006636
  
Biological name :slitrk2
  
Synonyms : SLIT and NTRK-like family, member 2 / slitrk2
  
Possible biological names infered from orthology : O96002 / Q810C0 / Q9H156
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 19258702
Gene end: 19261733
  
Corresponding Affymetrix probe sets: Dr.22669.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000027451
Ensembl peptide - ENSDARP00000154545
NCBI entrez gene - 794165     See in Manteia.
swissprot - F1QE14
ZFIN ID - ZDB-GENE-080327-7
Ensembl - ENSDARG00000006636
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLITRK2ENSGALG00000009192Gallus gallus
 O96002ENSG00000185985Homo sapiens
 Q810C0ENSMUSG00000036790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slitrk5a / SLIT and NTRK-like family, member 5a / O94991* / SLITRK5* / SLIT and NTRK like family member 5*ENSDARG0000010335947
slitrk5b / SLIT and NTRK-like family, member 5b / Q810B7* / O94991* / SLITRK5* / SLIT and NTRK-like protein 5 * / SLIT and NTRK like family member 5*ENSDARG0000007415343
slitrk3a / SLIT and NTRK-like family, member 3a / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007812343
slitrk3b / SLIT and NTRK-like family, member 3b / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007473941
slitrk4 / SLIT and NTRK-like family, member 4 / Q810B8* / Q8IW52*ENSDARG0000007978140
slitrk6 / SLIT and NTRK-like family, member 6 / Q9H5Y7*ENSDARG0000009876936
elfn1b / extracellular leucine-rich repeat and fibronectin type III domain containing 1b / ELFN1* / P0C7U0* / Q8C8T7* / Protein ELFN1 * / extracellular leucine rich repeat and fibronectin t...ENSDARG0000007437213
CR847537.1 / ELFN2* / Q5R3F8* / extracellular leucine rich repeat and fibronectin type III domain containing 2*ENSDARG0000011087411
elfn2a / extracellular leucine-rich repeat and fibronectin type III domain containing 2a / ELFN2* / Q5R3F8* / Q68FM6* / extracellular leucine rich repeat and fibronectin type III domain con...ENSDARG000000776098
si:ch73-185c24.2 / LRRC19* / Q8BZT5* / Q9H756* / leucine rich repeat containing 19* / Leucine-rich repeat-containing protein 19 *ENSDARG000000969086


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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