ENSDARG00000074739


Danio rerio

Features
Gene ID: ENSDARG00000074739
  
Biological name :slitrk3b
  
Synonyms : SLIT and NTRK-like family, member 3b / slitrk3b
  
Possible biological names infered from orthology : Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript variant 2, mRNA. / O94933 / Q810B9 / SLIT and NTRK like family member 3 / SLITRK3
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 36815484
Gene end: 36819624
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101275
Ensembl peptide - ENSDARP00000113605
NCBI entrez gene - 100007758     See in Manteia.
swissprot - B0S7B6
ZFIN ID - ZDB-GENE-070912-352
Ensembl - ENSDARG00000074739
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLITRK3ENSGALG00000042159Gallus gallus
 O94933ENSG00000121871Homo sapiens
 Q810B9ENSMUSG00000048304Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slitrk3a / SLIT and NTRK-like family, member 3a / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007812373
slitrk5a / SLIT and NTRK-like family, member 5a / O94991* / SLITRK5* / SLIT and NTRK like family member 5*ENSDARG0000010335940
slitrk2 / SLIT and NTRK-like family, member 2 / O96002* / Q810C0* / Q9H156*ENSDARG0000000663639
slitrk5b / SLIT and NTRK-like family, member 5b / Q810B7* / O94991* / SLITRK5* / SLIT and NTRK-like protein 5 * / SLIT and NTRK like family member 5*ENSDARG0000007415338
slitrk4 / SLIT and NTRK-like family, member 4 / Q810B8* / Q8IW52*ENSDARG0000007978136
slitrk6 / SLIT and NTRK-like family, member 6 / Q9H5Y7*ENSDARG0000009876931
CR847537.1 / ELFN2* / Q5R3F8* / extracellular leucine rich repeat and fibronectin type III domain containing 2*ENSDARG0000011087412
elfn1b / extracellular leucine-rich repeat and fibronectin type III domain containing 1b / ELFN1* / P0C7U0* / Q8C8T7* / Protein ELFN1 * / extracellular leucine rich repeat and fibronectin t...ENSDARG0000007437212
elfn2a / extracellular leucine-rich repeat and fibronectin type III domain containing 2a / ELFN2* / Q5R3F8* / Q68FM6* / extracellular leucine rich repeat and fibronectin type III domain con...ENSDARG000000776098
si:ch73-185c24.2 / LRRC19* / Q8BZT5* / Q9H756* / leucine rich repeat containing 19* / Leucine-rich repeat-containing protein 19 *ENSDARG000000969085


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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