ENSDARG00000074153


Danio rerio

Features
Gene ID: ENSDARG00000074153
  
Biological name :slitrk5b
  
Synonyms : SLIT and NTRK-like family, member 5b / slitrk5b
  
Possible biological names infered from orthology : O94991 / Q810B7 / SLIT and NTRK like family member 5 / SLIT and NTRK-like protein 5 / SLITRK5
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 53535419
Gene end: 53537989
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097720
NCBI entrez gene - 100331252     See in Manteia.
RefSeq - XM_002667321
swissprot - E7FFN0
ZFIN ID - ZDB-GENE-110408-55
Ensembl - ENSDARG00000074153
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLITRK5ENSGALG00000026361Gallus gallus
 O94991ENSG00000165300Homo sapiens
 Q810B7ENSMUSG00000033214Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slitrk5a / SLIT and NTRK-like family, member 5a / O94991* / SLITRK5* / SLIT and NTRK like family member 5*ENSDARG0000010335962
slitrk2 / SLIT and NTRK-like family, member 2 / O96002* / Q810C0* / Q9H156*ENSDARG0000000663643
slitrk3a / SLIT and NTRK-like family, member 3a / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007812341
slitrk3b / SLIT and NTRK-like family, member 3b / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007473939
slitrk4 / SLIT and NTRK-like family, member 4 / Q810B8* / Q8IW52*ENSDARG0000007978136
slitrk6 / SLIT and NTRK-like family, member 6 / Q9H5Y7*ENSDARG0000009876934
CR847537.1 / ELFN2* / Q5R3F8* / extracellular leucine rich repeat and fibronectin type III domain containing 2*ENSDARG0000011087413
elfn1b / extracellular leucine-rich repeat and fibronectin type III domain containing 1b / ELFN1* / P0C7U0* / Q8C8T7* / Protein ELFN1 * / extracellular leucine rich repeat and fibronectin t...ENSDARG0000007437212
elfn2a / extracellular leucine-rich repeat and fibronectin type III domain containing 2a / ELFN2* / Q5R3F8* / Q68FM6* / extracellular leucine rich repeat and fibronectin type III domain con...ENSDARG000000776098
si:ch73-185c24.2 / LRRC19* / Q8BZT5* / Q9H756* / leucine rich repeat containing 19* / Leucine-rich repeat-containing protein 19 *ENSDARG000000969085


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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