ENSG00000121871


Homo sapiens

Features
Gene ID: ENSG00000121871
  
Biological name :SLITRK3
  
Synonyms : O94933 / SLIT and NTRK like family member 3 / SLITRK3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q26.1
Gene start: 165186720
Gene end: 165197109
  
Corresponding Affymetrix probe sets: 206732_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420091
Ensembl peptide - ENSP00000241274
Ensembl peptide - ENSP00000419611
NCBI entrez gene - 22865     See in Manteia.
OMIM - 609679
RefSeq - NM_001318810
RefSeq - NM_001318811
RefSeq - NM_014926
RefSeq Peptide - NP_001305739
RefSeq Peptide - NP_001305740
RefSeq Peptide - NP_055741
swissprot - O94933
swissprot - C9K0R4
Ensembl - ENSG00000121871
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slitrk3aENSDARG00000078123Danio rerio
 slitrk3bENSDARG00000074739Danio rerio
 SLITRK3ENSGALG00000042159Gallus gallus
 Q810B9ENSMUSG00000048304Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O94991 / SLITRK5 / SLIT and NTRK like family member 5ENSG0000016530041
O96002 / Q9H156 / SLITRK2 / SLIT and NTRK like family member 2ENSG0000018598537
Q8IW52 / SLITRK4 / SLIT and NTRK like family member 4ENSG0000017954236
Q9H5Y7 / SLITRK6 / SLIT and NTRK like family member 6ENSG0000018456433
Q96PX8 / SLITRK1 / SLIT and NTRK like family member 1ENSG0000017823528
ELFN2 / Q5R3F8 / extracellular leucine rich repeat and fibronectin type III domain containing 2ENSG0000016689712
ELFN1 / P0C7U0 / extracellular leucine rich repeat and fibronectin type III domain containing 1ENSG0000022596812
LRRC19 / Q9H756 / leucine rich repeat containing 19ENSG000001844348


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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