ENSG00000185985


Homo sapiens

Features
Gene ID: ENSG00000185985
  
Biological name :SLITRK2
  
Synonyms : O96002 / Q9H156 / SLIT and NTRK like family member 2 / SLITRK2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q27.3
Gene start: 145817832
Gene end: 145829856
  
Corresponding Affymetrix probe sets: 206711_at (Human Genome U133 Plus 2.0 Array)   233051_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386149
Ensembl peptide - ENSP00000334374
Ensembl peptide - ENSP00000359521
NCBI entrez gene - 84631     See in Manteia.
OMIM - 300561
RefSeq - NM_001144008
RefSeq - NM_001144009
RefSeq - NM_001144010
RefSeq - NM_004709
RefSeq - NM_032539
RefSeq - XM_005262345
RefSeq - NM_001144003
RefSeq - NM_001144004
RefSeq - NM_001144005
RefSeq - NM_001144006
RefSeq - XM_005262342
RefSeq - XM_005262343
RefSeq - XM_005262344
RefSeq Peptide - NP_001137478
RefSeq Peptide - NP_001137480
RefSeq Peptide - NP_001137481
RefSeq Peptide - NP_001137482
RefSeq Peptide - NP_004700
RefSeq Peptide - NP_115928
RefSeq Peptide - NP_001137475
RefSeq Peptide - NP_001137476
RefSeq Peptide - NP_001137477
swissprot - O96002
swissprot - Q9H156
swissprot - B3KTY4
Ensembl - ENSG00000185985
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slitrk2ENSDARG00000006636Danio rerio
 SLITRK2ENSGALG00000009192Gallus gallus
 Q810C0ENSMUSG00000036790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O94991 / SLITRK5 / SLIT and NTRK like family member 5ENSG0000016530053
O94933 / SLITRK3 / SLIT and NTRK like family member 3ENSG0000012187143
Q8IW52 / SLITRK4 / SLIT and NTRK like family member 4ENSG0000017954243
Q9H5Y7 / SLITRK6 / SLIT and NTRK like family member 6ENSG0000018456439
Q96PX8 / SLITRK1 / SLIT and NTRK like family member 1ENSG0000017823534
ELFN2 / Q5R3F8 / extracellular leucine rich repeat and fibronectin type III domain containing 2ENSG0000016689714
ELFN1 / P0C7U0 / extracellular leucine rich repeat and fibronectin type III domain containing 1ENSG0000022596813
LRRC19 / Q9H756 / leucine rich repeat containing 19ENSG0000018443411


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0051965 positive regulation of synapse assembly ISS
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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