ENSMUSG00000036790


Mus musculus

Features
Gene ID: ENSMUSG00000036790
  
Biological name :Slitrk2
  
Synonyms : Q810C0 / SLIT and NTRK-like family, member 2 / Slitrk2
  
Possible biological names infered from orthology : O96002 / Q9H156
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: A7.1
Gene start: 66649318
Gene end: 66661393
  
Corresponding Affymetrix probe sets: 10599880 (MoGene1.0st)   10599884 (MoGene1.0st)   1441127_at (Mouse Genome 430 2.0 Array)   1441483_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044094
Ensembl peptide - ENSMUSP00000130057
NCBI entrez gene - 245450     See in Manteia.
MGI - MGI:2679449
RefSeq - XM_006528016
RefSeq - NM_001161431
RefSeq - NM_198863
RefSeq - XM_006528014
RefSeq Peptide - NP_001154903
RefSeq Peptide - NP_942563
swissprot - Q14DT0
swissprot - Q810C0
Ensembl - ENSMUSG00000036790
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slitrk2ENSDARG00000006636Danio rerio
 SLITRK2ENSGALG00000009192Gallus gallus
 O96002ENSG00000185985Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q810B7 / Slitrk5 / SLIT and NTRK-like protein 5 / O94991* / SLIT and NTRK like family member 5*ENSMUSG0000003321451
Q810B8 / Slitrk4 / SLIT and NTRK-like family, member 4 / Q8IW52*ENSMUSG0000004669943
Q810B9 / Slitrk3 / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript variant 2, mRNA. / O94933* / SLIT and NTRK like family member 3*ENSMUSG0000004830443
Q8C110 / Slitrk6 / SLIT and NTRK-like family, member 6 / Q9H5Y7*ENSMUSG0000004587139
Q810C1 / Slitrk1 / SLIT and NTRK-like family, member 1 / Q96PX8*ENSMUSG0000007547835
Elfn1 / Q8C8T7 / Protein ELFN1 / P0C7U0* / extracellular leucine rich repeat and fibronectin type III domain containing 1*ENSMUSG0000004898814
Elfn2 / Q68FM6 / Mus musculus leucine rich repeat and fibronectin type III, extracellular 2 (Elfn2), transcript variant 1, mRNA. / Q5R3F8* / extracellular leucine rich repeat and fibronecti...ENSMUSG0000004346013
Lrrc19 / Q8BZT5 / Leucine-rich repeat-containing protein 19 / Q9H756* / leucine rich repeat containing 19*ENSMUSG0000004979910


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IDA
 biological_processGO:0051965 positive regulation of synapse assembly IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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