ENSDARG00000098377


Danio rerio

Features
Gene ID: ENSDARG00000098377
  
Biological name :tnfrsf11b
  
Synonyms : tnfrsf11b / tumor necrosis factor receptor superfamily, member 11b
  
Possible biological names infered from orthology : O00300 / O08712 / O95407 / TNF receptor superfamily member 11b / TNF receptor superfamily member 6b / TNFRSF6B / tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 142044
Gene end: 148055
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133879
Ensembl peptide - ENSDARP00000149288
swissprot - A0A0R4IF49
ZFIN ID - ZDB-GENE-081104-76
Ensembl - ENSDARG00000098377
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNFRSF11BENSGALG00000043167Gallus gallus
 TNFRSF6BENSGALG00000006106Gallus gallus
 O00300ENSG00000164761Homo sapiens
 O95407ENSG00000243509Homo sapiens
 O08712ENSMUSG00000063727Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnfrsf1b / tumor necrosis factor receptor superfamily, member 1B / P20333* / P25119* / TNF receptor superfamily member 1B*ENSDARG0000007016524
tnfrsf21 / tumor necrosis factor receptor superfamily, member 21 / O75509* / Q9EPU5* / TNF receptor superfamily member 21*ENSDARG0000000180723
zgc:153759 / si:dkey-23c22.9 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000009238122
zgc:153759 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000006896922
si:dkey-23c22.7 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000009519322
si:ch211-261n11.7 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000006896621
zgc:153631 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000006899321
tnfrsf11a / tumor necrosis factor receptor superfamily, member 11a, NFKB activator / CD40* / Q9Y6Q6* / O35305* / P25942* / P27512* / CD40 molecule* / TNF receptor superfamily member 11a* / ...ENSDARG0000008780419
si:ch211-261n11.8 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000008990119
cd40 / CD40 molecule, TNF receptor superfamily member 5 / P27512* / O35305* / P25942* / Q9Y6Q6* / TNFRSF11A* / CD40 molecule* / TNF receptor superfamily member 11a* / Tumor necrosis factor ...ENSDARG0000005496819
si:dkey-23c22.5 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000009289218
CT737125.1 / Q92956* / TNFRSF14* / TNF receptor superfamily member 14* / tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)*ENSDARG0000006899116


Protein motifs (from Interpro)
Interpro ID Name
 IPR001368  TNFR/NGFR cysteine-rich region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009612 response to mechanical stimulus IDA


Pathways (from Reactome)
Pathway description
TNFs bind their physiological receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr