ENSDARG00000099035


Danio rerio

Features
Gene ID: ENSDARG00000099035
  
Biological name :pcdh1g33
  
Synonyms : pcdh1g33 / protocadherin 1 gamma 33
  
Possible biological names infered from orthology : PCDHGC4 / PCDHGC5 / protocadherin gamma subfamily C, 4 / protocadherin gamma subfamily C, 5 / Q9Y5F6 / Q9Y5F7
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 21783213
Gene end: 21820002
  
Corresponding Affymetrix probe sets: Dr.8598.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000140627
NCBI entrez gene - 100003438     See in Manteia.
RefSeq - NM_001109736
RefSeq Peptide - NP_001103206
swissprot - A0A0J9YJK6
ZFIN ID - ZDB-GENE-071004-76
Ensembl - ENSDARG00000099035
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Y5F6ENSG00000240764Homo sapiens
 Q9Y5F7ENSG00000242419Homo sapiens
 Pcdhgc4ENSMUSG00000023036Mus musculus
 Pcdhgc5ENSMUSG00000102543Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh1gc5 / pcdh1gc6 / protocadherin 1 gamma c 5 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000010482673
pcdh1gc6 / protocadherin 1 gamma c 6 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000010395069
pcdh1g29 / protocadherin 1 gamma 29 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000010449769
pcdh1g26 / protocadherin 1 gamma 26 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000009993169
pcdh1g11 / protocadherin 1 gamma 11 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB...ENSDARG0000010166546
pcdh1g1 / protocadherin 1 gamma 1 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB1*...ENSDARG0000010400743
si:ch73-233f7.4 / PCDHGC3 (1 of many) / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000009856633
si:ch73-233f7.7 / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000009948733
pcdhb / protocadherin b / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000007702333
si:ch73-233f7.6 / PCDHGC3 (1 of many) / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000010166733
BX957322.1 / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000008956232
si:ch73-233f7.3 / PCDHGC3 (1 of many) / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000010219832
CT737184.2 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / PCDHGA1* / PCDHGA9* / PCDHGB1* / PCDHGB2* / PCDHGB3* / PCDHGB4* / PCDHGB5* ...ENSDARG0000011293032
pcdh1g13 / protocadherin 1 gamma 13 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB...ENSDARG0000009896331
pcdh1g14 / protocadherin 1 gamma 14 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB...ENSDARG0000010405731


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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