ENSDARG00000100499


Danio rerio

Features
Gene ID: ENSDARG00000100499
  
Biological name :cpeb4b
  
Synonyms : cpeb4b / cytoplasmic polyadenylation element binding protein 4b
  
Possible biological names infered from orthology : CPEB4 / cytoplasmic polyadenylation element binding protein 4 / Q17RY0 / Q7TN98
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 41310551
Gene end: 41369539
  
Corresponding Affymetrix probe sets: Dr.11344.1.A1_at (Zebrafish Array)   Dr.11344.2.S1_at (Zebrafish Array)   Dr.24497.2.S1_a_at (Zebrafish Array)   Dr.2608.1.S1_at (Zebrafish Array)   Dr.4132.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000154293
Ensembl peptide - ENSDARP00000137460
NCBI entrez gene - 100333151     See in Manteia.
RefSeq - NM_001351713
RefSeq Peptide - NP_001338642
swissprot - A0A0G2KYC0
ZFIN ID - ZDB-GENE-170601-167
Ensembl - ENSDARG00000100499
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CPEB4ENSGALG00000033512Gallus gallus
 CPEB4ENSG00000113742Homo sapiens
 Cpeb4ENSMUSG00000020300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cpeb4a / cytoplasmic polyadenylation element binding protein 4a / CPEB4* / Q17RY0* / Q7TN98* / cytoplasmic polyadenylation element binding protein 4*ENSDARG0000005669177
cpeb3 / cytoplasmic polyadenylation element binding protein 3 / Q7TN99* / Q8NE35*ENSDARG0000006010353
cpeb2 / cytoplasmic polyadenylation element binding protein 2 / Q7Z5Q1*ENSDARG0000005260444
Q9YGX5 / cpeb1b / cytoplasmic polyadenylation element binding protein 1b / CPEB1* / RPS17* / P70166* / P08708* / Q9BZB8* / AC245033.1* / ribosomal protein S17* / cytoplasmic polyadenylation...ENSDARG0000000845421
cpeb1a / cytoplasmic polyadenylation element binding protein 1a / CPEB1* / RPS17* / P08708* / Q9BZB8* / P70166* / AC245033.1* / ribosomal protein S17* / cytoplasmic polyadenylation element ...ENSDARG0000004593220


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR032296  Cytoplasmic polyadenylation element-binding protein, ZZ domain
 IPR034819  Cytoplasmic polyadenylation element-binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0045182 translation regulator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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