ENSG00000113742


Homo sapiens

Features
Gene ID: ENSG00000113742
  
Biological name :CPEB4
  
Synonyms : CPEB4 / cytoplasmic polyadenylation element binding protein 4 / Q17RY0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q35.2
Gene start: 173888280
Gene end: 173961976
  
Corresponding Affymetrix probe sets: 224828_at (Human Genome U133 Plus 2.0 Array)   224829_at (Human Genome U133 Plus 2.0 Array)   224831_at (Human Genome U133 Plus 2.0 Array)   242280_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429048
Ensembl peptide - ENSP00000427990
Ensembl peptide - ENSP00000429092
Ensembl peptide - ENSP00000430345
Ensembl peptide - ENSP00000429423
Ensembl peptide - ENSP00000265085
Ensembl peptide - ENSP00000334533
NCBI entrez gene - 80315     See in Manteia.
OMIM - 610607
RefSeq - XM_005265994
RefSeq - NM_001308189
RefSeq - NM_001308191
RefSeq - NM_001308192
RefSeq - NM_001308193
RefSeq - NM_030627
RefSeq Peptide - NP_085130
RefSeq Peptide - NP_001295118
RefSeq Peptide - NP_001295120
RefSeq Peptide - NP_001295121
RefSeq Peptide - NP_001295122
swissprot - E5RJM0
swissprot - Q17RY0
swissprot - B7ZLQ8
swissprot - E5RFP2
swissprot - H0YBG1
Ensembl - ENSG00000113742
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cpeb4aENSDARG00000056691Danio rerio
 cpeb4bENSDARG00000100499Danio rerio
 CPEB4ENSGALG00000033512Gallus gallus
 Cpeb4ENSMUSG00000020300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CPEB2 / Q7Z5Q1 / cytoplasmic polyadenylation element binding protein 2ENSG0000013744958
CPEB3 / Q8NE35 / cytoplasmic polyadenylation element binding protein 3ENSG0000010786457
CPEB1 / Q9BZB8 / cytoplasmic polyadenylation element binding protein 1ENSG0000021457524
AC245033.1ENSG0000026083622
RPS17 / P08708 / ribosomal protein S17ENSG000001827741


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR032296  Cytoplasmic polyadenylation element-binding protein, ZZ domain
 IPR034819  Cytoplasmic polyadenylation element-binding protein
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002931 response to ischemia ISS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0035235 ionotropic glutamate receptor signaling pathway ISS
 biological_processGO:0036294 cellular response to decreased oxygen levels ISS
 biological_processGO:0042149 cellular response to glucose starvation ISS
 biological_processGO:0043524 negative regulation of neuron apoptotic process ISS
 biological_processGO:0071230 cellular response to amino acid stimulus ISS
 biological_processGO:2000766 negative regulation of cytoplasmic translation IBA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0014069 postsynaptic density ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite ISS
 cellular_componentGO:0030426 growth cone IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043005 neuron projection IBA
 cellular_componentGO:0043197 dendritic spine IEA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IBA
 molecular_functionGO:0000900 translation repressor activity, mRNA regulatory element binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008135 translation factor activity, RNA binding IBA
 molecular_functionGO:0043022 ribosome binding IBA
 molecular_functionGO:0045182 translation regulator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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