ENSG00000260836


Homo sapiens

Features
Gene ID: ENSG00000260836
  
Biological name :AC245033.1
  
Synonyms : AC245033.1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q25.2
Gene start: 82536788
Gene end: 82573194
  
Corresponding Affymetrix probe sets: 201665_x_at (Human Genome U133 Plus 2.0 Array)   211487_x_at (Human Genome U133 Plus 2.0 Array)   212578_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454786
Ensembl peptide - ENSP00000496443
swissprot - H3BNC9
Ensembl - ENSG00000260836
  
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cpeb1aENSDARG00000045932Danio rerio
 cpeb1bENSDARG00000008454Danio rerio
 CPEB1ENSGALG00000002150Gallus gallus
 Cpeb1ENSMUSG00000025586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CPEB1 / Q9BZB8 / cytoplasmic polyadenylation element binding protein 1ENSG0000021457578
CPEB4 / Q17RY0 / cytoplasmic polyadenylation element binding protein 4ENSG0000011374228
CPEB3 / Q8NE35 / cytoplasmic polyadenylation element binding protein 3ENSG0000010786427
CPEB2 / Q7Z5Q1 / cytoplasmic polyadenylation element binding protein 2ENSG0000013744926
RPS17 / P08708 / ribosomal protein S17ENSG0000018277423


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001210  Ribosomal protein S17e
 IPR018273  Ribosomal protein S17e, conserved site
 IPR032292  Cytoplasmic polyadenylation element-binding protein 1, N-terminal
 IPR032296  Cytoplasmic polyadenylation element-binding protein, ZZ domain
 IPR034819  Cytoplasmic polyadenylation element-binding protein
 IPR034977  CPEB-1, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily
 IPR036401  Ribosomal protein S17e-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:2000766 negative regulation of cytoplasmic translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0043005 neuron projection IBA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IBA
 molecular_functionGO:0000900 translation repressor activity, mRNA regulatory element binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0008135 translation factor activity, RNA binding IBA
 molecular_functionGO:0043022 ribosome binding IBA
 molecular_functionGO:0045182 translation regulator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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