ENSGALG00000033512


Gallus gallus

Features
Gene ID: ENSGALG00000033512
  
Biological name :CPEB4
  
Synonyms : CPEB4 / cytoplasmic polyadenylation element binding protein 4
  
Possible biological names infered from orthology : Q17RY0 / Q7TN98
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 9433355
Gene end: 9465773
  
Corresponding Affymetrix probe sets: Gga.12834.1.S1_s_at (Chicken Array)   Gga.5115.1.S1_s_at (Chicken Array)   GgaAffx.25687.1.S1_at (Chicken Array)   GgaAffx.8933.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046649
Ensembl peptide - ENSGALP00000054572
Ensembl peptide - ENSGALP00000051293
NCBI entrez gene - 416363     See in Manteia.
RefSeq - XM_004944878
RefSeq - XM_414678
swissprot - A0A1D5PNX6
swissprot - A0A1D5PET4
swissprot - A0A1D5P1V7
Ensembl - ENSGALG00000033512
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cpeb4aENSDARG00000056691Danio rerio
 cpeb4bENSDARG00000100499Danio rerio
 CPEB4ENSG00000113742Homo sapiens
 Cpeb4ENSMUSG00000020300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CPEB3 / cytoplasmic polyadenylation element binding protein 3 / Q7TN99* / Q8NE35*ENSGALG0000000691258
CPEB2 / cytoplasmic polyadenylation element binding protein 2 / Q7Z5Q1* / cytoplasmic polyadenylation element-binding protein 2 isoform 1 *ENSGALG0000001451656
CPEB1 / RPS17* / P08708* / P70166* / Q9BZB8* / AC245033.1* / ribosomal protein S17* / cytoplasmic polyadenylation element binding protein 1* / Mus musculus cytoplasmic polyadenylation eleme...ENSGALG0000000215023


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR032296  Cytoplasmic polyadenylation element-binding protein, ZZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002931 response to ischemia IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0071230 cellular response to amino acid stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0045182 translation regulator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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