ENSDARG00000101116


Danio rerio

Features
Gene ID: ENSDARG00000101116
  
Biological name :vps33a
  
Synonyms : vacuolar protein sorting 33A / vps33a
  
Possible biological names infered from orthology : AC048338.1 / Q96AX1 / Q9D2N9 / VPS33A, CORVET/HOPS core subunit
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 69622005
Gene end: 69639049
  
Corresponding Affymetrix probe sets: Dr.5579.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133149
NCBI entrez gene - 448942     See in Manteia.
RefSeq - NM_001099973
RefSeq Peptide - NP_001093443
swissprot - A0A0R4ID82
ZFIN ID - ZDB-GENE-040914-82
Ensembl - ENSDARG00000101116
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004440Gallus gallus
 AC048338.1ENSG00000256861Homo sapiens
 Q96AX1ENSG00000139719Homo sapiens
 Q9D2N9ENSMUSG00000029434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vps33b / vacuolar protein sorting 33B / Q9H267* / P59016* / AC068831.7* / VPS33B, late endosome and lysosome associated*ENSDARG0000004481332


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein
 IPR027121  Vacuolar protein sorting-associated protein 33


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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