ENSGALG00000004440


Gallus gallus

Features
Gene ID: ENSGALG00000004440
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC048338.1 / Q96AX1 / Q9D2N9 / VPS33A / VPS33A, CORVET/HOPS core subunit
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 5847999
Gene end: 5855216
  
Corresponding Affymetrix probe sets: Gga.8303.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007052
Ensembl peptide - ENSGALP00000062785
Ensembl peptide - ENSGALP00000059734
NCBI entrez gene - 416861     See in Manteia.
RefSeq - XM_415153
swissprot - E1BVA6
swissprot - A0A1L1RVD2
swissprot - A0A1L1RLU2
Ensembl - ENSGALG00000004440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps33aENSDARG00000101116Danio rerio
 AC048338.1ENSG00000256861Homo sapiens
 Q96AX1ENSG00000139719Homo sapiens
 Q9D2N9ENSMUSG00000029434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VPS33B / Q9H267* / P59016* / AC068831.7* / vacuolar protein sorting 33B* / VPS33B, late endosome and lysosome associated*ENSGALG0000001283331


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein
 IPR027482  Sec1-like, domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030220 platelet formation IEA
 biological_processGO:0043473 pigmentation IEA
 biological_processGO:0048070 regulation of developmental pigmentation IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0033263 CORVET complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr