ENSGALG00000012833


Gallus gallus

Features
Gene ID: ENSGALG00000012833
  
Biological name :VPS33B
  
Synonyms : VPS33B
  
Possible biological names infered from orthology : AC068831.7 / P59016 / Q9H267 / vacuolar protein sorting 33B / VPS33B, late endosome and lysosome associated
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 20088100
Gene end: 20095144
  
Corresponding Affymetrix probe sets: Gga.2308.1.S1_s_at (Chicken Array)   GgaAffx.501.1.A1_at (Chicken Array)   GgaAffx.501.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044233
Ensembl peptide - ENSGALP00000064338
Ensembl peptide - ENSGALP00000001108
NCBI entrez gene - 425858     See in Manteia.
RefSeq - XM_015292122
RefSeq - NM_001031348
RefSeq - XM_015292119
RefSeq - XM_015292120
RefSeq - XM_015292121
RefSeq Peptide - NP_001026519
swissprot - A0A1L1RZN9
swissprot - A0A1D5NV60
swissprot - Q5ZL71
Ensembl - ENSGALG00000012833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps33bENSDARG00000044813Danio rerio
 AC068831.7ENSG00000284946Homo sapiens
 Q9H267ENSG00000184056Homo sapiens
 P59016ENSMUSG00000030534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96AX1* / Q9D2N9* / VPS33A* / AC048338.1* / VPS33A, CORVET/HOPS core subunit*ENSGALG0000000444029


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein
 IPR027121  Vacuolar protein sorting-associated protein 33
 IPR027482  Sec1-like, domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017185 peptidyl-lysine hydroxylation IEA
 biological_processGO:0030199 collagen fibril organization IEA
 biological_processGO:0032963 collagen metabolic process IEA
 biological_processGO:0035855 megakaryocyte development IEA
 biological_processGO:0070889 platelet alpha granule organization IEA
 biological_processGO:0090330 regulation of platelet aggregation IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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