ENSDARG00000102340


Danio rerio

Features
Gene ID: ENSDARG00000102340
  
Biological name :ptn
  
Synonyms : pleiotrophin / ptn
  
Possible biological names infered from orthology : P21246 / P63089
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 1301436
Gene end: 1360495
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140433
Ensembl peptide - ENSDARP00000155604
NCBI entrez gene - 368211     See in Manteia.
RefSeq - NM_001003981
RefSeq Peptide - NP_001003981
swissprot - Q502U6
ZFIN ID - ZDB-GENE-030624-1
Ensembl - ENSDARG00000102340
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTNENSGALG00000040493Gallus gallus
 PTNENSG00000105894Homo sapiens
 PtnENSMUSG00000029838Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mdkb / midkine b / MDK* / P21741* / P12025* / midkine*ENSDARG0000002070838
mdka / midkine a / MDK* / P21741* / P12025* / midkine*ENSDARG0000003603637


Protein motifs (from Interpro)
Interpro ID Name
 IPR000762  Midkine heparin-binding growth factor
 IPR020089  Pleiotrophin/Midkine, N-terminal domain
 IPR020090  Pleiotrophin/Midkine, C-terminal domain
 IPR020091  Pleiotrophin/Midkine disulphide-rich domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IMP
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 molecular_functionGO:0008083 growth factor activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr