ENSGALG00000040493


Gallus gallus

Features
Gene ID: ENSGALG00000040493
  
Biological name :PTN
  
Synonyms : pleiotrophin / PTN
  
Possible biological names infered from orthology : P21246 / P63089
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 57724423
Gene end: 57794404
  
Corresponding Affymetrix probe sets: Gga.1479.1.S1_at (Chicken Array)   Gga.1479.2.S1_a_at (Chicken Array)   Gga.16474.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049947
NCBI entrez gene - 418125     See in Manteia.
RefSeq - NM_001276362
RefSeq - XM_015285608
RefSeq - XM_015285616
RefSeq Peptide - NP_001263291
swissprot - A0A1D5PB28
Ensembl - ENSGALG00000040493
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptnENSDARG00000102340Danio rerio
 PTNENSG00000105894Homo sapiens
 PtnENSMUSG00000029838Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MDK / midkine precursor / P12025* / P21741* / midkine*ENSGALG0000000836741


Protein motifs (from Interpro)
Interpro ID Name
 IPR000762  Midkine heparin-binding growth factor
 IPR020089  Pleiotrophin/Midkine, N-terminal domain
 IPR020090  Pleiotrophin/Midkine, C-terminal domain
 IPR020091  Pleiotrophin/Midkine disulphide-rich domain superfamily
 IPR020092  Pleiotrophin/Midkine heparin-binding growth factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IEA
 biological_processGO:0007612 learning IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0030282 bone mineralization IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0008083 growth factor activity IEA
 molecular_functionGO:0008201 heparin binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0035374 chondroitin sulfate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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