ENSDARG00000102353


Danio rerio

Features
Gene ID: ENSDARG00000102353
  
Biological name :ddx47
  
Synonyms : ddx47 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
  
Possible biological names infered from orthology : DEAD-box helicase 47 / Probable ATP-dependent RNA helicase DDX47 / Q9CWX9 / Q9H0S4
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 1378098
Gene end: 1388936
  
Corresponding Affymetrix probe sets: Dr.14725.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132528
Ensembl peptide - ENSDARP00000134322
swissprot - A0A0R4IH57
swissprot - A0A0R4IKR1
ZFIN ID - ZDB-GENE-050522-359
Ensembl - ENSDARG00000102353
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DDX47ENSGALG00000011794Gallus gallus
 DDX47ENSG00000213782Homo sapiens
 Ddx47ENSMUSG00000030204Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ddx28 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 / Q9CWT6* / Q9NUL7* / DEAD-box helicase 28* / Probable ATP-dependent RNA helicase DDX28 *ENSDARG0000006041123


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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