ENSDARG00000104128


Danio rerio

Features
Gene ID: ENSDARG00000104128
  
Biological name :snx2
  
Synonyms : snx2 / sorting nexin 2
  
Possible biological names infered from orthology : O60749 / Q9CWK8
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 144154
Gene end: 175343
  
Corresponding Affymetrix probe sets: Dr.10271.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000141472
swissprot - A0A0G2L9K3
ZFIN ID - ZDB-GENE-051120-45
Ensembl - ENSDARG00000104128
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX2ENSGALG00000005337Gallus gallus
 SNX2ENSG00000205302Homo sapiens
 Snx2ENSMUSG00000034484Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx1a / sorting nexin 1a / SNX1* / Q13596* / sorting nexin 1*ENSDARG0000007103145
snx6 / sorting nexin 6 / Q6P8X1* / Q9UNH7* / Sorting nexin-6 Sorting nexin-6, N-terminally processed*ENSDARG0000005844415
snx5 / sorting nexin 5 / Q9D8U8* / Q9Y5X3*ENSDARG0000002044212


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR005329  Sorting nexin, N-terminal
 IPR015404  Sorting nexin Vps5-like, C-terminal
 IPR028653  Sorting nexin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0030904 retromer complex IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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