ENSDARG00000105349


Danio rerio

Features
Gene ID: ENSDARG00000105349
  
Biological name :si:cabz01069582.1
  
Synonyms : si:cabz01069582.1
  
Possible biological names infered from orthology : P4HA3 / prolyl 4-hydroxylase subunit alpha 3 / Q7Z4N8
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 31144720
Gene end: 31146808
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142472
swissprot - A0A140LGU3
ZFIN ID - ZDB-GENE-160114-8
Ensembl - ENSDARG00000105349
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P4HA3ENSGALG00000042030Gallus gallus
 P4HA3ENSG00000149380Homo sapiens
 P4ha3ENSMUSG00000051048Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
p4ha3 / prolyl 4-hydroxylase, alpha polypeptide III / Q7Z4N8* / prolyl 4-hydroxylase subunit alpha 3*ENSDARG0000010369273
zgc:152670ENSDARG0000001703829
p4ha1b / prolyl 4-hydroxylase, alpha polypeptide I b / P4HA1* / P13674* / Q60715* / prolyl 4-hydroxylase subunit alpha 1*ENSDARG0000007108228
p4ha2 / procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 / O15460* / prolyl 4-hydroxylase subunit alpha 2*ENSDARG0000001008527
p4ha1a / prolyl 4-hydroxylase, alpha polypeptide I a / P4HA1* / P13674* / Q60715* / prolyl 4-hydroxylase subunit alpha 1*ENSDARG0000003353725
si:ch73-68b22.2ENSDARG0000009460921


Protein motifs (from Interpro)
Interpro ID Name
 IPR013547  Prolyl 4-hydroxylase alpha-subunit, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019511 peptidyl-proline hydroxylation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0004656 procollagen-proline 4-dioxygenase activity IEA
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr