ENSG00000006530


Homo sapiens

Features
Gene ID: ENSG00000006530
  
Biological name :AGK
  
Synonyms : acylglycerol kinase / AGK / Q53H12
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q34
Gene start: 141551189
Gene end: 141655244
  
Corresponding Affymetrix probe sets: 1555610_at (Human Genome U133 Plus 2.0 Array)   218568_at (Human Genome U133 Plus 2.0 Array)   222132_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418101
Ensembl peptide - ENSP00000487274
Ensembl peptide - ENSP00000420776
Ensembl peptide - ENSP00000420540
Ensembl peptide - ENSP00000418789
Ensembl peptide - ENSP00000347581
NCBI entrez gene - 55750     See in Manteia.
OMIM - 610345
RefSeq - XM_011516397
RefSeq - NM_018238
RefSeq - XM_005250023
RefSeq Peptide - NP_060708
swissprot - F8WDD1
swissprot - E9PG39
swissprot - Q53H12
swissprot - A4D1U5
swissprot - E9PC15
Ensembl - ENSG00000006530
  
Related genetic diseases (OMIM): 212350 - Sengers syndrome, 212350
  614691 - Cataract 38, autosomal recessive, 614691
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 agkENSDARG00000009837Danio rerio
 AGKENSGALG00000012870Gallus gallus
 AgkENSMUSG00000029916Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CERK / Q8TCT0 / ceramide kinaseENSG0000010042219
CERKL / Q49MI3 / ceramide kinase likeENSG0000018845219
SPHK2 / Q9NRA0 / sphingosine kinase 2ENSG0000006317617
SPHK1 / Q9NYA1 / sphingosine kinase 1ENSG0000017617017


Protein motifs (from Interpro)
Interpro ID Name
 IPR001206  Diacylglycerol kinase, catalytic domain
 IPR016064  NAD kinase/diacylglycerol kinase-like domain superfamily
 IPR017438  Inorganic polyphosphate/ATP-NAD kinase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0045039 protein import into mitochondrial inner membrane IDA
 biological_processGO:0046474 glycerophospholipid biosynthetic process TAS
 biological_processGO:0046486 glycerolipid metabolic process IEA
 biological_processGO:0046513 ceramide biosynthetic process IEA
 biological_processGO:0046834 lipid phosphorylation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane TAS
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005758 mitochondrial intermembrane space IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031305 integral component of mitochondrial inner membrane IDA
 cellular_componentGO:0042721 mitochondrial inner membrane protein insertion complex IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001727 lipid kinase activity IEA
 molecular_functionGO:0001729 ceramide kinase activity IEA
 molecular_functionGO:0003951 NAD+ kinase activity IEA
 molecular_functionGO:0004143 diacylglycerol kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047620 acylglycerol kinase activity TAS


Pathways (from Reactome)
Pathway description
Glycerophospholipid biosynthesis
Signaling by BRAF and RAF fusions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
Show

 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
Show

 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
Show

 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
Show

 HP:0000545 Myopia 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0001131 Corneal dystrophy 
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001270 Motor retardation 
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
Show

 HP:0001510 Growth retardation 
Show

 HP:0001639 Hypertrophic cardiomyopathy 
Show

 HP:0001873 Thrombocytopenia 
Show

 HP:0002093 Respiratory insufficiency 
Show

 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
Show

 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
Show

 HP:0003198 Myopathy 
Show

 HP:0003388 Easy fatigability 
Show

 HP:0003535 3-Methylglutaconic aciduria 
Show

 HP:0003546 Exercise intolerance 
Show

 HP:0003593 Early onset 
Show

 HP:0003737 Mitochondrial myopathy 
Show

 HP:0003828 Variable expressivity 
Show

 HP:0004901 exercise lactic acidemia 
Show

 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000006530 AGK / Q53H12 / acylglycerol kinase  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr