ENSG00000057294


Homo sapiens

Features
Gene ID: ENSG00000057294
  
Biological name :PKP2
  
Synonyms : PKP2 / plakophilin 2 / Q99959
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p11.21
Gene start: 32790745
Gene end: 32896840
  
Corresponding Affymetrix probe sets: 207717_s_at (Human Genome U133 Plus 2.0 Array)   214154_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000070846
Ensembl peptide - ENSP00000481383
Ensembl peptide - ENSP00000342800
NCBI entrez gene - 5318     See in Manteia.
OMIM - 602861
RefSeq - NM_001005242
RefSeq - NM_004572
RefSeq Peptide - NP_001005242
RefSeq Peptide - NP_004563
swissprot - A0A087WXY2
swissprot - Q99959
Ensembl - ENSG00000057294
  
Related genetic diseases (OMIM): 609040 - Arrhythmogenic right ventricular dysplasia 9, 609040
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkp2ENSDARG00000023026Danio rerio
 PKP2ENSGALG00000012913Gallus gallus
 Pkp2ENSMUSG00000041957Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CTNND2 / Q9UQB3 / catenin delta 2ENSG0000016986227
PKP1 / Q13835 / plakophilin 1ENSG0000008127727
PKP4 / Q99569 / plakophilin 4ENSG0000014428325
PKP3 / Q9Y446 / plakophilin 3ENSG0000018436325
ARVCF / O00192 / ARVCF, delta catenin family memberENSG0000009988924
CTNND1 / O60716 / catenin delta 1ENSG0000019856123


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002159 desmosome assembly IMP
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0010765 positive regulation of sodium ion transport ISS
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0045110 intermediate filament bundle assembly IMP
 biological_processGO:0048496 maintenance of animal organ identity IMP
 biological_processGO:0055010 ventricular cardiac muscle tissue morphogenesis IMP
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0070268 cornification TAS
 biological_processGO:0072659 protein localization to plasma membrane IMP
 biological_processGO:0086002 cardiac muscle cell action potential involved in contraction IMP
 biological_processGO:0086005 ventricular cardiac muscle cell action potential IMP
 biological_processGO:0086019 cell-cell signaling involved in cardiac conduction IMP
 biological_processGO:0086064 cell communication by electrical coupling involved in cardiac conduction ISS
 biological_processGO:0086073 bundle of His cell-Purkinje myocyte adhesion involved in cell communication IMP
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IMP
 biological_processGO:0098609 cell-cell adhesion ISS
 biological_processGO:0098911 regulation of ventricular cardiac muscle cell action potential IMP
 cellular_componentGO:0001533 cornified envelope TAS
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0005912 adherens junction IEA
 cellular_componentGO:0014704 intercalated disc IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome ISS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005080 protein kinase C binding IPI
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017080 sodium channel regulator activity ISS
 molecular_functionGO:0019215 intermediate filament binding IDA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IMP
 molecular_functionGO:0044325 ion channel binding ISS
 molecular_functionGO:0045294 alpha-catenin binding IPI
 molecular_functionGO:0045296 cadherin binding IDA
 molecular_functionGO:0086083 cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication IC


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001645 Sudden cardiac death 
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 HP:0001962 Palpitations 
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 HP:0002617 Aneurysm 
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 HP:0004308 Ventricular arrhythmia 
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 HP:0006698 Ventricular aneurysms 
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 HP:0011663 Arrhythmogenic right ventricular cardiomyopathy "Arrhythmogenic right ventricular cardiomyopathy (ARVC) is defined histologically by the presence of progressive replacement of right ventricular myocardium with adipose and fibrous tissue often confined to a triangle of dysplasia comprising the right ventricular inflow, outflow, and apex. While these pathologic abnormalities can result in functional and morphological right ventricular abnormalities, they also occur in the left ventricle, producing a DCM phenotype, or can be present in the absence of clinically detectable structural changes in either ventricle. For the purposes of this classification, ARVC is defined by the presence of right ventricular dysfunction (global or regional), with or without left ventricular disease, in the presence of histological evidence for the disease and/or electrocardiographic abnormalities in accordance with published criteria." [pmid:17916581]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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