ENSGALG00000012913


Gallus gallus

Features
Gene ID: ENSGALG00000012913
  
Biological name :PKP2
  
Synonyms : PKP2 / plakophilin 2
  
Possible biological names infered from orthology : Q99959
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 58878156
Gene end: 58920195
  
Corresponding Affymetrix probe sets: Gga.9080.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021029
NCBI entrez gene - 418130     See in Manteia.
RefSeq - XM_416362
swissprot - E1C2V3
Ensembl - ENSGALG00000012913
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkp2ENSDARG00000023026Danio rerio
 PKP2ENSG00000057294Homo sapiens
 Pkp2ENSMUSG00000041957Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKP1 / plakophilin 1 / P97350* / Q13835*ENSGALG0000000029924
PKP4 / plakophilin-4 / Q68FH0* / Q99569*ENSGALG0000001256122
CTNND2 / catenin delta 2 / Q9UQB3* / catenin delta-2 isoform 2 *ENSGALG0000001300121
ARVCF / ARVCF, delta catenin family member / O00192* / P98203* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSGALG0000004337320
PKP3 / plakophilin 3 / Q9QY23* / Q9Y446*ENSGALG0000000426020
CTNND1 / catenin delta 1 / P30999* / O60716* / Gm28635* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 7, mRNA.*ENSGALG0000000733014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002159 desmosome assembly IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0045110 intermediate filament bundle assembly IEA
 biological_processGO:0048496 maintenance of animal organ identity IEA
 biological_processGO:0055010 ventricular cardiac muscle tissue morphogenesis IEA
 biological_processGO:0072659 protein localization to plasma membrane IEA
 biological_processGO:0086002 cardiac muscle cell action potential involved in contraction IEA
 biological_processGO:0086005 ventricular cardiac muscle cell action potential IEA
 biological_processGO:0086019 cell-cell signaling involved in cardiac conduction IEA
 biological_processGO:0086073 bundle of His cell-Purkinje myocyte adhesion involved in cell communication IEA
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 biological_processGO:0098911 regulation of ventricular cardiac muscle cell action potential IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0005912 adherens junction IEA
 cellular_componentGO:0014704 intercalated disc IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome IEA
 molecular_functionGO:0005080 protein kinase C binding IEA
 molecular_functionGO:0019215 intermediate filament binding IEA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IEA
 molecular_functionGO:0045294 alpha-catenin binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr