ENSGALG00000013001


Gallus gallus

Features
Gene ID: ENSGALG00000013001
  
Biological name :CTNND2
  
Synonyms : catenin delta 2 / CTNND2
  
Possible biological names infered from orthology : catenin delta-2 isoform 2 / Q9UQB3
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 77650257
Gene end: 78277058
  
Corresponding Affymetrix probe sets: Gga.10319.1.S1_at (Chicken Array)   GgaAffx.24091.1.S1_at (Chicken Array)   GgaAffx.8243.1.S1_at (Chicken Array)   GgaAffx.9214.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000036312
Ensembl peptide - ENSGALP00000023368
NCBI entrez gene - 420922     See in Manteia.
RefSeq - XM_015282263
RefSeq - XM_015282261
RefSeq - XM_015282262
RefSeq - XM_015282257
RefSeq - XM_015282258
RefSeq - XM_015282259
RefSeq - XM_015282260
swissprot - F1NG94
swissprot - E1C7G4
Ensembl - ENSGALG00000013001
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ctnnd2aENSDARG00000062415Danio rerio
 ctnnd2bENSDARG00000003779Danio rerio
 CTNND2ENSG00000169862Homo sapiens
 Ctnnd2ENSMUSG00000022240Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKP4 / plakophilin-4 / Q68FH0* / Q99569*ENSGALG0000001256151
ARVCF / ARVCF, delta catenin family member / O00192* / P98203* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSGALG0000004337332
PKP2 / plakophilin 2 / Q99959*ENSGALG0000001291319
PKP3 / plakophilin 3 / Q9QY23* / Q9Y446*ENSGALG0000000426018
PKP1 / plakophilin 1 / P97350* / Q13835*ENSGALG0000000029917
CTNND1 / catenin delta 1 / P30999* / O60716* / Gm28635* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 7, mRNA.*ENSGALG0000000733017


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050808 synapse organization IEA
 biological_processGO:0060828 regulation of canonical Wnt signaling pathway IEA
 biological_processGO:0060997 dendritic spine morphogenesis IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0043204 perikaryon IEA
 molecular_functionGO:0008013 beta-catenin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr