ENSGALG00000012561


Gallus gallus

Features
Gene ID: ENSGALG00000012561
  
Biological name :PKP4
  
Synonyms : PKP4 / plakophilin-4
  
Possible biological names infered from orthology : Q68FH0 / Q99569
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 36558094
Gene end: 36624931
  
Corresponding Affymetrix probe sets: Gga.5277.2.S1_at (Chicken Array)   Gga.5277.3.S1_at (Chicken Array)   GgaAffx.12308.1.S1_s_at (Chicken Array)   GgaAffx.7971.1.S1_at (Chicken Array)   GgaAffx.7971.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020484
Ensembl peptide - ENSGALP00000063877
Ensembl peptide - ENSGALP00000059530
NCBI entrez gene - 424328     See in Manteia.
RefSeq - XM_015290153
RefSeq - XM_015290149
RefSeq - XM_015290150
RefSeq - XM_015290151
RefSeq - XM_015290152
RefSeq - NM_001006529
RefSeq Peptide - NP_001006529
swissprot - E1C625
swissprot - A0A1L1RYE6
swissprot - A0A1L1RL84
Ensembl - ENSGALG00000012561
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkp4ENSDARG00000045331Danio rerio
 PKP4ENSG00000144283Homo sapiens
 Pkp4ENSMUSG00000026991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CTNND2 / catenin delta 2 / Q9UQB3* / catenin delta-2 isoform 2 *ENSGALG0000001300148
ARVCF / ARVCF, delta catenin family member / O00192* / P98203* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSGALG0000004337330
PKP2 / plakophilin 2 / Q99959*ENSGALG0000001291318
CTNND1 / catenin delta 1 / P30999* / O60716* / Gm28635* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 7, mRNA.*ENSGALG0000000733018
PKP3 / plakophilin 3 / Q9QY23* / Q9Y446*ENSGALG0000000426017
PKP1 / plakophilin 1 / P97350* / Q13835*ENSGALG0000000029916


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin
 IPR028443  Plakophilin-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007043 cell-cell junction assembly IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0032467 positive regulation of cytokinesis IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0009898 cytoplasmic side of plasma membrane IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome IEA
 cellular_componentGO:0030496 midbody IEA
 cellular_componentGO:0044291 cell-cell contact zone IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0051233 spindle midzone IEA
 cellular_componentGO:0072686 mitotic spindle IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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