ENSDARG00000045331


Danio rerio

Features
Gene ID: ENSDARG00000045331
  
Biological name :pkp4
  
Synonyms : pkp4 / plakophilin 4
  
Possible biological names infered from orthology : Q68FH0 / Q99569
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 12197186
Gene end: 12296170
  
Corresponding Affymetrix probe sets: Dr.7431.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000145966
Ensembl peptide - ENSDARP00000128634
Ensembl peptide - ENSDARP00000151456
Ensembl peptide - ENSDARP00000156646
NCBI entrez gene - 561566     See in Manteia.
swissprot - E7EXI3
ZFIN ID - ZDB-GENE-120411-14
Ensembl - ENSDARG00000045331
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PKP4ENSGALG00000012561Gallus gallus
 PKP4ENSG00000144283Homo sapiens
 Pkp4ENSMUSG00000026991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ctnnd2a / catenin (cadherin-associated protein), delta 2a / CTNND2* / Q9UQB3* / catenin delta 2* / catenin delta-2 isoform 2 *ENSDARG0000006241546
ctnnd2b / catenin (cadherin-associated protein), delta 2b / CTNND2* / Q9UQB3* / catenin delta 2* / catenin delta-2 isoform 2 *ENSDARG0000000377946
arvcfb / ARVCF, delta catenin family member b / ARVCF* / P98203* / O00192* / ARVCF, delta catenin family member* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSDARG0000006168830
arvcfa / ARVCF, delta catenin family member a / ARVCF* / P98203* / O00192* / ARVCF, delta catenin family member* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSDARG0000007432925
ctnnd1 / catenin (cadherin-associated protein), delta 1 / O60716* / P30999* / Gm28635* / catenin delta 1* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta...ENSDARG0000007823325
pkp3b / plakophilin 3b / PKP3* / Q9Y446* / Q9QY23* / plakophilin 3*ENSDARG0000007943818
pkp3a / plakophilin 3a / PKP3* / Q9Y446* / Q9QY23* / plakophilin 3*ENSDARG0000005186118
pkp2 / plakophilin 2 / Q99959*ENSDARG0000002302616
pkp1b / plakophilin 1b / PKP1* / P97350* / Q13835* / plakophilin 1*ENSDARG0000005270515
pkp1a / plakophilin 1a / PKP1* / P97350* / Q13835* / plakophilin 1*ENSDARG000000905985


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin
 IPR028443  Plakophilin-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0032467 positive regulation of cytokinesis IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0098609 cell-cell adhesion IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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