ENSDARG00000074329


Danio rerio

Features
Gene ID: ENSDARG00000074329
  
Biological name :arvcfa
  
Synonyms : arvcfa / ARVCF, delta catenin family member a
  
Possible biological names infered from orthology : Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog / ARVCF / ARVCF, delta catenin family member / O00192 / P98203
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 466926
Gene end: 505370
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119030
swissprot - F1R953
ZFIN ID - ZDB-GENE-091113-43
Ensembl - ENSDARG00000074329
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARVCFENSGALG00000043373Gallus gallus
 ARVCFENSG00000099889Homo sapiens
 ArvcfENSMUSG00000000325Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arvcfb / ARVCF, delta catenin family member b / ARVCF* / P98203* / O00192* / ARVCF, delta catenin family member* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSDARG0000006168858
ctnnd1 / catenin (cadherin-associated protein), delta 1 / O60716* / P30999* / Gm28635* / catenin delta 1* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta...ENSDARG0000007823338
ctnnd2b / catenin (cadherin-associated protein), delta 2b / CTNND2* / Q9UQB3* / catenin delta 2* / catenin delta-2 isoform 2 *ENSDARG0000000377936
ctnnd2a / catenin (cadherin-associated protein), delta 2a / CTNND2* / Q9UQB3* / catenin delta 2* / catenin delta-2 isoform 2 *ENSDARG0000006241536
pkp4 / plakophilin 4 / Q68FH0* / Q99569*ENSDARG0000004533135
pkp3a / plakophilin 3a / PKP3* / Q9Y446* / Q9QY23* / plakophilin 3*ENSDARG0000005186122
pkp3b / plakophilin 3b / PKP3* / Q9Y446* / Q9QY23* / plakophilin 3*ENSDARG0000007943821
pkp2 / plakophilin 2 / Q99959*ENSDARG0000002302619
pkp1b / plakophilin 1b / PKP1* / P97350* / Q13835* / plakophilin 1*ENSDARG0000005270517
pkp1a / plakophilin 1a / PKP1* / P97350* / Q13835* / plakophilin 1*ENSDARG000000905986


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin
 IPR028444  Armadillo repeat protein deleted in velo-cardio-facial syndrome


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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