ENSGALG00000043373


Gallus gallus

Features
Gene ID: ENSGALG00000043373
  
Biological name :ARVCF
  
Synonyms : ARVCF / ARVCF, delta catenin family member
  
Possible biological names infered from orthology : Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog / O00192 / P98203
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 1064142
Gene end: 1189296
  
Corresponding Affymetrix probe sets: Gga.4967.1.S1_a_at (Chicken Array)   GgaAffx.21311.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055083
NCBI entrez gene - 395119     See in Manteia.
RefSeq - XM_015275170
RefSeq - NM_204465
RefSeq - XM_015275168
RefSeq - XM_015275169
RefSeq - XM_015275158
RefSeq - XM_015275159
RefSeq - XM_015275160
RefSeq - XM_015275161
RefSeq - XM_015275162
RefSeq - XM_015275163
RefSeq - XM_015275164
RefSeq - XM_015275165
RefSeq - XM_015275166
RefSeq - XM_015275167
RefSeq Peptide - NP_989796
swissprot - A0A1D5PQC1
Ensembl - ENSGALG00000043373
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arvcfaENSDARG00000074329Danio rerio
 arvcfbENSDARG00000061688Danio rerio
 ARVCFENSG00000099889Homo sapiens
 ArvcfENSMUSG00000000325Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CTNND2 / catenin delta 2 / Q9UQB3* / catenin delta-2 isoform 2 *ENSGALG0000001300136
PKP4 / plakophilin-4 / Q68FH0* / Q99569*ENSGALG0000001256136
CTNND1 / catenin delta 1 / P30999* / O60716* / Gm28635* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 7, mRNA.*ENSGALG0000000733034
PKP2 / plakophilin 2 / Q99959*ENSGALG0000001291320
PKP1 / plakophilin 1 / P97350* / Q13835*ENSGALG0000000029919
PKP3 / plakophilin 3 / Q9QY23* / Q9Y446*ENSGALG0000000426019


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028435  Plakophilin/Delta catenin
 IPR028444  Armadillo repeat protein deleted in velo-cardio-facial syndrome


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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