ENSGALG00000004260


Gallus gallus

Features
Gene ID: ENSGALG00000004260
  
Biological name :PKP3
  
Synonyms : PKP3 / plakophilin 3
  
Possible biological names infered from orthology : Q9QY23 / Q9Y446
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 1517982
Gene end: 1524901
  
Corresponding Affymetrix probe sets: GgaAffx.2634.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006763
NCBI entrez gene - 422994     See in Manteia.
RefSeq - XM_015286253
RefSeq - XM_015286254
swissprot - E1BRA8
Ensembl - ENSGALG00000004260
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkp3aENSDARG00000051861Danio rerio
 pkp3bENSDARG00000079438Danio rerio
 PKP3ENSG00000184363Homo sapiens
 Pkp3ENSMUSG00000054065Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKP1 / plakophilin 1 / P97350* / Q13835*ENSGALG0000000029923
CTNND2 / catenin delta 2 / Q9UQB3* / catenin delta-2 isoform 2 *ENSGALG0000001300122
PKP2 / plakophilin 2 / Q99959*ENSGALG0000001291322
PKP4 / plakophilin-4 / Q68FH0* / Q99569*ENSGALG0000001256122
ARVCF / ARVCF, delta catenin family member / O00192* / P98203* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSGALG0000004337321
CTNND1 / catenin delta 1 / P30999* / O60716* / Gm28635* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 7, mRNA.*ENSGALG0000000733015


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028434  Plakophilin-3
 IPR028435  Plakophilin/Delta catenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002159 desmosome assembly IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0072659 protein localization to plasma membrane IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 biological_processGO:1902373 negative regulation of mRNA catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome IEA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0045294 alpha-catenin binding IEA
 molecular_functionGO:0050839 cell adhesion molecule binding IEA
 molecular_functionGO:0098641 cadherin binding involved in cell-cell adhesion IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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