ENSDARG00000079438


Danio rerio

Features
Gene ID: ENSDARG00000079438
  
Biological name :pkp3b
  
Synonyms : pkp3b / plakophilin 3b
  
Possible biological names infered from orthology : PKP3 / plakophilin 3 / Q9QY23 / Q9Y446
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 32926760
Gene end: 32981559
  
Corresponding Affymetrix probe sets: Dr.19082.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000144453
Ensembl peptide - ENSDARP00000101802
NCBI entrez gene - 100330353     See in Manteia.
RefSeq - XM_002662838
swissprot - F1QWE6
swissprot - A0A286YB85
ZFIN ID - ZDB-GENE-130530-870
Ensembl - ENSDARG00000079438
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PKP3ENSGALG00000004260Gallus gallus
 PKP3ENSG00000184363Homo sapiens
 Pkp3ENSMUSG00000054065Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pkp3a / plakophilin 3a / PKP3* / Q9Y446* / Q9QY23* / plakophilin 3*ENSDARG0000005186159
ctnnd2b / catenin (cadherin-associated protein), delta 2b / CTNND2* / Q9UQB3* / catenin delta 2* / catenin delta-2 isoform 2 *ENSDARG0000000377925
pkp4 / plakophilin 4 / Q68FH0* / Q99569*ENSDARG0000004533125
ctnnd2a / catenin (cadherin-associated protein), delta 2a / CTNND2* / Q9UQB3* / catenin delta 2* / catenin delta-2 isoform 2 *ENSDARG0000006241525
arvcfb / ARVCF, delta catenin family member b / ARVCF* / P98203* / O00192* / ARVCF, delta catenin family member* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSDARG0000006168824
pkp2 / plakophilin 2 / Q99959*ENSDARG0000002302624
pkp1b / plakophilin 1b / PKP1* / P97350* / Q13835* / plakophilin 1*ENSDARG0000005270523
ctnnd1 / catenin (cadherin-associated protein), delta 1 / O60716* / P30999* / Gm28635* / catenin delta 1* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta...ENSDARG0000007823322
arvcfa / ARVCF, delta catenin family member a / ARVCF* / P98203* / O00192* / ARVCF, delta catenin family member* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSDARG0000007432921
pkp1a / plakophilin 1a / PKP1* / P97350* / Q13835* / plakophilin 1*ENSDARG000000905988


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028434  Plakophilin-3
 IPR028435  Plakophilin/Delta catenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0030057 desmosome IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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