ENSGALG00000000299


Gallus gallus

Features
Gene ID: ENSGALG00000000299
  
Biological name :PKP1
  
Synonyms : PKP1 / plakophilin 1
  
Possible biological names infered from orthology : P97350 / Q13835
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 818283
Gene end: 850755
  
Corresponding Affymetrix probe sets: GgaAffx.181.1.S1_at (Chicken Array)   GgaAffx.20372.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000030824
NCBI entrez gene - 421158     See in Manteia.
RefSeq - XM_015298865
RefSeq - XM_419240
swissprot - E1C1N1
Ensembl - ENSGALG00000000299
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkp1aENSDARG00000090598Danio rerio
 pkp1bENSDARG00000052705Danio rerio
 PKP1ENSG00000081277Homo sapiens
 Pkp1ENSMUSG00000026413Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKP2 / plakophilin 2 / Q99959*ENSGALG0000001291332
PKP3 / plakophilin 3 / Q9QY23* / Q9Y446*ENSGALG0000000426028
ARVCF / ARVCF, delta catenin family member / O00192* / P98203* / Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog *ENSGALG0000004337326
PKP4 / plakophilin-4 / Q68FH0* / Q99569*ENSGALG0000001256126
CTNND2 / catenin delta 2 / Q9UQB3* / catenin delta-2 isoform 2 *ENSGALG0000001300125
CTNND1 / catenin delta 1 / P30999* / O60716* / Gm28635* / predicted gene 28635* / Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 7, mRNA.*ENSGALG0000000733019


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR028432  Plakophilin-1
 IPR028435  Plakophilin/Delta catenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0045110 intermediate filament bundle assembly IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 biological_processGO:1902373 negative regulation of mRNA catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030057 desmosome IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IEA
 molecular_functionGO:0005521 lamin binding IEA


Pathways (from Reactome)
Pathway description
Apoptotic cleavage of cell adhesion proteins
Neutrophil degranulation
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000010638 CASP3 / caspase 3 / P42574* / P70677* / Caspase-3 Caspase-3 subunit p17 Caspase-3 subunit p12*  / reaction






 

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