ENSG00000077279


Homo sapiens

Features
Gene ID: ENSG00000077279
  
Biological name :DCX
  
Synonyms : DCX / doublecortin / O43602
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q23
Gene start: 111293779
Gene end: 111412429
  
Corresponding Affymetrix probe sets: 204850_s_at (Human Genome U133 Plus 2.0 Array)   204851_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000489635
Ensembl peptide - ENSP00000490878
Ensembl peptide - ENSP00000490614
Ensembl peptide - ENSP00000490448
Ensembl peptide - ENSP00000490357
Ensembl peptide - ENSP00000490068
Ensembl peptide - ENSP00000348553
Ensembl peptide - ENSP00000350776
Ensembl peptide - ENSP00000361061
Ensembl peptide - ENSP00000418811
Ensembl peptide - ENSP00000419861
NCBI entrez gene - 1641     See in Manteia.
OMIM - 300121
RefSeq - XM_017029312
RefSeq - NM_000555
RefSeq - NM_001195553
RefSeq - NM_178151
RefSeq - NM_178152
RefSeq - NM_178153
RefSeq - XM_011530878
RefSeq - XM_011530879
RefSeq - XM_011530880
RefSeq Peptide - NP_001182482
RefSeq Peptide - NP_835364
RefSeq Peptide - NP_835365
RefSeq Peptide - NP_835366
RefSeq Peptide - NP_000546
swissprot - E7EU50
swissprot - O43602
swissprot - A0A1B0GWD1
swissprot - A0A1B0GUE1
swissprot - A8K340
swissprot - H3BLV5
Ensembl - ENSG00000077279
  
Related genetic diseases (OMIM): 300067 - Lissencephaly, X-linked, 300067
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DCXENSGALG00000007993Gallus gallus
 DcxENSMUSG00000031285Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DCLK1 / O15075 / doublecortin like kinase 1ENSG0000013308370
DCLK2 / Q8N568 / doublecortin like kinase 2ENSG0000017039068
DCLK3 / Q9C098 / doublecortin like kinase 3ENSG0000016367311
STK33 / Q9BYT3 / serine/threonine kinase 33ENSG000001304137
PHKG2 / P15735 / phosphorylase kinase catalytic subunit gamma 2ENSG000001568733
PHKG1 / Q16816 / phosphorylase kinase catalytic subunit gamma 1ENSG000001647763


Protein motifs (from Interpro)
Interpro ID Name
 IPR003533  Doublecortin domain
 IPR017302  Neuronal migration protein doublecortin, chordata
 IPR036572  Doublecortin domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IDA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0007417 central nervous system development TAS
 biological_processGO:0007420 brain development IEA
 biological_processGO:0021766 hippocampus development IEA
 biological_processGO:0021819 layer formation in cerebral cortex IEA
 biological_processGO:0021860 pyramidal neuron development IEA
 biological_processGO:0021952 central nervous system projection neuron axonogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0048675 axon extension IEA
 biological_processGO:0048813 dendrite morphogenesis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton TAS
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005875 microtubule associated complex TAS
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043005 neuron projection IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008017 microtubule binding IMP
 molecular_functionGO:0019901 protein kinase binding IPI


Pathways (from Reactome)
Pathway description
Neurofascin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000054 Micropenis 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001417 X-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the X chromosome." [HPO:curators]
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 HP:0001522 Death in infancy 
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 HP:0003593 Early onset 
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 HP:0003829 Incomplete penetrance 
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 HP:0008897 Growth retardation, progressive 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000163531 NFASC / O94856 / neurofascin  / reaction / complex






 

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