ENSG00000090382


Homo sapiens

Features
Gene ID: ENSG00000090382
  
Biological name :LYZ
  
Synonyms : lysozyme / LYZ / P61626
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q15
Gene start: 69348341
Gene end: 69354234
  
Corresponding Affymetrix probe sets: 1555745_a_at (Human Genome U133 Plus 2.0 Array)   213975_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261267
Ensembl peptide - ENSP00000449969
Ensembl peptide - ENSP00000449898
NCBI entrez gene - 4069     See in Manteia.
OMIM - 153450
RefSeq - NM_000239
RefSeq Peptide - NP_000230
swissprot - B2R4C5
swissprot - A0A0B4J259
swissprot - F8VV32
swissprot - P61626
Ensembl - ENSG00000090382
  
Related genetic diseases (OMIM): 105200 - Amyloidosis, renal, 105200
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYZENSGALG00000009963Gallus gallus
 9530003J23RikENSMUSG00000020177Mus musculus
 Lyz1ENSMUSG00000069515Mus musculus
 Lyz2ENSMUSG00000069516Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LYZL1 / Q6UWQ5 / lysozyme like 1ENSG0000012056345
LYZL2 / Q7Z4W2 / lysozyme like 2ENSG0000015103345
Q8IXA5 / SPACA3 / sperm acrosome associated 3ENSG0000014131644
Q96QH8 / SPACA5 / sperm acrosome associated 5ENSG0000017148941
LYZL6 / O75951 / lysozyme like 6ENSG0000027572241
Q96QH8 / SPACA5B / sperm acrosome associated 5BENSG0000017147841
LYZL4 / Q96KX0 / lysozyme like 4ENSG0000015709337
LALBA / P00709 / lactalbumin alphaENSG0000016753135


Protein motifs (from Interpro)
Interpro ID Name
 IPR000974  Glycoside hydrolase, family 22, lysozyme
 IPR001916  Glycoside hydrolase, family 22
 IPR019799  Glycoside hydrolase, family 22, conserved site
 IPR023346  Lysozyme-like domain superfamily
 IPR030056  Lysozyme C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001895 retina homeostasis HEP
 biological_processGO:0006954 inflammatory response TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016998 cell wall macromolecule catabolic process IBA
 biological_processGO:0019730 antimicrobial humoral response TAS
 biological_processGO:0019835 cytolysis IEA
 biological_processGO:0031640 killing of cells of other organism IDA
 biological_processGO:0042742 defense response to bacterium IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0050829 defense response to Gram-negative bacterium IBA
 biological_processGO:0050830 defense response to Gram-positive bacterium IBA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space TAS
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0035580 specific granule lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1904724 tertiary granule lumen TAS
 molecular_functionGO:0003796 lysozyme activity IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Antimicrobial peptides
Amyloid fiber formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000093 Proteinuria 
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 HP:0000100 Nephrotic syndrome 
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 HP:0000112 Nephropathy "A nonspecific term referring to disease or damage of the kidneys." [HPO:curators]
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 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0000988 Skin rash 
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 HP:0001396 Cholestasis 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0003216 Generalized amyloid deposition 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000090382 LYZ / P61626 / lysozyme  / -






 

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