ENSG00000100348


Homo sapiens

Features
Gene ID: ENSG00000100348
  
Biological name :TXN2
  
Synonyms : Q99757 / thioredoxin 2 / TXN2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q12.3
Gene start: 36467036
Gene end: 36482030
  
Corresponding Affymetrix probe sets: 209077_at (Human Genome U133 Plus 2.0 Array)   209078_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000216185
Ensembl peptide - ENSP00000385393
Ensembl peptide - ENSP00000409407
Ensembl peptide - ENSP00000469160
NCBI entrez gene - 25828     See in Manteia.
OMIM - 609063
RefSeq - XM_011530111
RefSeq - NM_012473
RefSeq - XM_005261508
RefSeq - XM_006724226
RefSeq Peptide - NP_036605
swissprot - Q99757
swissprot - M0QXH0
swissprot - F8WDN2
Ensembl - ENSG00000100348
  
Related genetic diseases (OMIM): 616811 - ?Combined oxidative phosphorylation deficiency 29, 616811
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 txn2ENSDARG00000034777Danio rerio
 TXN2ENSGALG00000012532Gallus gallus
 Txn2ENSMUSG00000005354Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005746  Thioredoxin
 IPR013766  Thioredoxin domain
 IPR017937  Thioredoxin, conserved site
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0006662 glycerol ether metabolic process IEA
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0009725 response to hormone IEA
 biological_processGO:0009749 response to glucose IEA
 biological_processGO:0014070 response to organic cyclic compound IEA
 biological_processGO:0031669 cellular response to nutrient levels IEA
 biological_processGO:0034599 cellular response to oxidative stress TAS
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0045454 cell redox homeostasis IEA
 biological_processGO:0048678 response to axon injury IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008113 peptide-methionine (S)-S-oxide reductase activity IEA
 molecular_functionGO:0015035 protein disulfide oxidoreductase activity IEA
 molecular_functionGO:0033743 peptide-methionine (R)-S-oxide reductase activity IEA


Pathways (from Reactome)
Pathway description
Degradation of cysteine and homocysteine
Detoxification of Reactive Oxygen Species


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000488 Retinopathy 
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 HP:0000648 Optic atrophy 
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 HP:0001138 Optic neuropathy 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002188 Delayed myelination 
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 HP:0002283 Diffuse brain atrophy 
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 HP:0002416 Subependymal cysts 
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 HP:0002490 Increased CSF lactate "Increased concentration of lactate in the cerebrospinal fluid." [HPO:curators]
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 HP:0002922 Increased CSF protein 
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 HP:0003577 Onset at birth 
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 HP:0003593 Early onset 
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 HP:0003676 Progressive disorder 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0011923 Decreased activity of mitochondrial complex I "A reduction in the activity of the `mitochondrial respiratory chain complex I` (GO:0005747), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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 HP:0011924 Decreased activity of mitochondrial complex III "A reduction in the activity of the `mitochondrial respiratory chain complex III` (GO:0005750), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0040078 Axonal degeneration 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000126432 PRDX5 / P30044 / peroxiredoxin 5  / reaction
 ENSG00000165672 PRDX3 / P30048 / peroxiredoxin 3  / reaction
 ENSG00000184470 Q9NNW7 / TXNRD2 / thioredoxin reductase 2  / reaction
 ENSG00000128309 MPST / P25325 / mercaptopyruvate sulfurtransferase  / reaction / complex






 

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