ENSG00000102245


Homo sapiens

Features
Gene ID: ENSG00000102245
  
Biological name :CD40LG
  
Synonyms : CD40LG / CD40 ligand / P29965
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q26.3
Gene start: 136648193
Gene end: 136660390
  
Corresponding Affymetrix probe sets: 207892_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359662
Ensembl peptide - ENSP00000359663
NCBI entrez gene - 959     See in Manteia.
OMIM - 300386
RefSeq - NM_000074
RefSeq Peptide - NP_000065
swissprot - P29965
swissprot - Q3L8U2
Ensembl - ENSG00000102245
  
Related genetic diseases (OMIM): 308230 - Immunodeficiency, X-linked, with hyper-IgM, 308230
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CD40LGENSGALG00000006415Gallus gallus
 Cd40lgENSMUSG00000031132Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003263  CD40 ligand
 IPR006052  Tumour necrosis factor domain
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR021184  Tumour necrosis factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007159 leukocyte cell-cell adhesion NAS
 biological_processGO:0007257 activation of JUN kinase activity IDA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0030168 platelet activation IEA
 biological_processGO:0030183 B cell differentiation IEA
 biological_processGO:0031295 T cell costimulation TAS
 biological_processGO:0032733 positive regulation of interleukin-10 production IDA
 biological_processGO:0032735 positive regulation of interleukin-12 production IDA
 biological_processGO:0032753 positive regulation of interleukin-4 production IDA
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway TAS
 biological_processGO:0042100 B cell proliferation IEA
 biological_processGO:0042102 positive regulation of T cell proliferation IDA
 biological_processGO:0043066 negative regulation of apoptotic process IDA
 biological_processGO:0045190 isotype switching IEA
 biological_processGO:0048305 immunoglobulin secretion IEA
 biological_processGO:0050776 regulation of immune response TAS
 biological_processGO:0051023 regulation of immunoglobulin secretion IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IDA
 biological_processGO:2000353 positive regulation of endothelial cell apoptotic process IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005125 cytokine activity IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0005174 CD40 receptor binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
TNFR2 non-canonical NF-kB pathway
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000230 Gingivitis 
Show

 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
Show

 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
Show

 HP:0001873 Thrombocytopenia 
Show

 HP:0001875 Neutropenia 
Show

 HP:0001878 Hemolytic anemia 
Show

 HP:0002014 Diarrhea 
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0002718 Recurrent bacterial infections 
Show

 HP:0002720 Decreased IgA 
Show

 HP:0002721 Immunodeficiency 
Show

 HP:0002847 Primary dysfunction of B-lymphocyte isotype switching and memory B-cell generation 
Show

 HP:0002849 Lymph nodes lack germinal centers 
Show

 HP:0002959 Impaired Ig class switch recombination (CSR) 
Show

 HP:0002961 Dysgammaglobulinemia 
Show

 HP:0003496 Increased IgM level "An abnormally increased level of immunoglobulin M in blood." [HPO:probinson]
Show

 HP:0004315 Decreased IgG level "An abnormally decreased level of immunoglobulin G in blood." [HPO:probinson]
Show

 HP:0005419 Decreased T cell activation 
Show

 HP:0005479 Decreased IgE 
Show

 HP:0010280 Stomatitis "Stomatitis is an inflammation of the mucous membranes of any of the structures in the mouth." [HPO:curators]
Show

 HP:0030812 Enlarged tonsils "Increase in size of the tonsils, small collections of lymphoid tissue facing into the aerodigestive tract on either side of the back part of the throat." [] {comment="HPO:probinson"}
Show

 HP:0200123 Chronic hepatitis 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000110330 BIRC2 / Q13490 / baculoviral IAP repeat containing 2  / complex / reaction
 ENSG00000127191 TRAF2 / Q12933 / TNF receptor associated factor 2  / complex / reaction
 ENSG00000023445 BIRC3 / Q13489 / baculoviral IAP repeat containing 3  / complex / reaction
 ENSG00000131323 TRAF3 / Q13114 / TNF receptor associated factor 3  / reaction / complex
 ENSG00000006062 Q99558 / MAP3K14 / mitogen-activated protein kinase kinase kinase 14  / complex / reaction
 ENSG00000101017 CD40 / P25942 / CD40 molecule  / complex / reaction
 ENSG00000102245 CD40LG / P29965 / CD40 ligand  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr