ENSG00000103266


Homo sapiens

Features
Gene ID: ENSG00000103266
  
Biological name :STUB1
  
Synonyms : Q9UNE7 / STIP1 homology and U-box containing protein 1 / STUB1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 680224
Gene end: 682870
  
Corresponding Affymetrix probe sets: 217934_x_at (Human Genome U133 Plus 2.0 Array)   227625_s_at (Human Genome U133 Plus 2.0 Array)   233049_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457583
Ensembl peptide - ENSP00000456591
Ensembl peptide - ENSP00000219548
Ensembl peptide - ENSP00000456875
Ensembl peptide - ENSP00000476751
Ensembl peptide - ENSP00000457090
Ensembl peptide - ENSP00000457228
NCBI entrez gene - 10273     See in Manteia.
OMIM - 607207
RefSeq - NM_001293197
RefSeq - NM_005861
RefSeq Peptide - NP_001280126
RefSeq Peptide - NP_005852
swissprot - V9GYH3
swissprot - H3BS86
swissprot - H3BTA3
swissprot - H3BUD0
swissprot - Q9UNE7
Ensembl - ENSG00000103266
  
Related genetic diseases (OMIM): 615768 - Spinocerebellar ataxia, autosomal recessive 16, 615768
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stub1ENSDARG00000045228Danio rerio
 STUB1ENSGALG00000041432Gallus gallus
 Stub1ENSMUSG00000039615Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGTA / O43765 / small glutamine rich tetratricopeptide repeat containing alphaENSG0000010496912
SGTB / Q96EQ0 / small glutamine rich tetratricopeptide repeat containing betaENSG0000019786011
TTC12 / Q9H892 / tetratricopeptide repeat domain 12ENSG0000014929211


Protein motifs (from Interpro)
Interpro ID Name
 IPR003613  U box domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IMP
 biological_processGO:0002931 response to ischemia ISS
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process ISS
 biological_processGO:0006515 protein quality control for misfolded or incompletely synthesized proteins IDA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway IMP
 biological_processGO:0030579 ubiquitin-dependent SMAD protein catabolic process IDA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IEA
 biological_processGO:0031398 positive regulation of protein ubiquitination IDA
 biological_processGO:0031647 regulation of protein stability IDA
 biological_processGO:0031943 regulation of glucocorticoid metabolic process IDA
 biological_processGO:0032091 negative regulation of protein binding IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IDA
 biological_processGO:0034605 cellular response to heat ISS
 biological_processGO:0038128 ERBB2 signaling pathway TAS
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process TAS
 biological_processGO:0051443 positive regulation of ubiquitin-protein transferase activity IEA
 biological_processGO:0051604 protein maturation TAS
 biological_processGO:0051865 protein autoubiquitination IDA
 biological_processGO:0070534 protein K63-linked ubiquitination IDA
 biological_processGO:0071218 cellular response to misfolded protein IDA
 biological_processGO:0071456 cellular response to hypoxia ISS
 biological_processGO:0090035 positive regulation of chaperone-mediated protein complex assembly IDA
 cellular_componentGO:0000151 ubiquitin ligase complex IDA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0031371 ubiquitin conjugating enzyme complex TAS
 cellular_componentGO:0042405 nuclear inclusion body IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0001664 G-protein coupled receptor binding IPI
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0019900 kinase binding IPI
 molecular_functionGO:0030544 Hsp70 protein binding IPI
 molecular_functionGO:0030674 protein binding, bridging TAS
 molecular_functionGO:0030911 TPR domain binding IDA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0034450 ubiquitin-ubiquitin ligase activity ISS
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046332 SMAD binding IPI
 molecular_functionGO:0051787 misfolded protein binding IDA
 molecular_functionGO:0051879 Hsp90 protein binding IDA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IMP


Pathways (from Reactome)
Pathway description
Downregulation of TGF-beta receptor signaling
Downregulation of ERBB2 signaling
Regulation of RUNX2 expression and activity
Regulation of PTEN stability and activity
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000544 External ophthalmoplegia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0002070 Limb ataxia 
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 HP:0002078 Truncal ataxia 
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 HP:0002317 Unsteady gait 
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 HP:0003676 Progressive disorder 
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 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166949 SMAD3 / P84022 / SMAD family member 3  / reaction / complex
 ENSG00000124813 RUNX2 / Q13950 / runt related transcription factor 2  / reaction / complex






 

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