ENSG00000104969


Homo sapiens

Features
Gene ID: ENSG00000104969
  
Biological name :SGTA
  
Synonyms : O43765 / SGTA / small glutamine rich tetratricopeptide repeat containing alpha
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.3
Gene start: 2754714
Gene end: 2783371
  
Corresponding Affymetrix probe sets: 201396_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000221566
Ensembl peptide - ENSP00000466461
Ensembl peptide - ENSP00000468443
NCBI entrez gene - 6449     See in Manteia.
OMIM - 603419
RefSeq - XM_011528178
RefSeq - NM_003021
RefSeq Peptide - NP_003012
swissprot - K7EMD6
swissprot - O43765
swissprot - K7ERW5
Ensembl - ENSG00000104969
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgtaENSDARG00000019941Danio rerio
 SGTAENSGALG00000014067Gallus gallus
 SgtaENSMUSG00000004937Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGTB / Q96EQ0 / small glutamine rich tetratricopeptide repeat containing betaENSG0000019786058
TTC12 / Q9H892 / tetratricopeptide repeat domain 12ENSG0000014929223
STUB1 / Q9UNE7 / STIP1 homology and U-box containing protein 1ENSG0000010326612


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR032374  SGTA, homodimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016032 viral process IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IDA
 biological_processGO:1903070 negative regulation of ER-associated ubiquitin-dependent protein catabolic process IDA
 biological_processGO:1903071 positive regulation of ER-associated ubiquitin-dependent protein catabolic process IMP
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0043621 protein self-association IDA
 molecular_functionGO:1904288 BAT3 complex binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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