ENSGALG00000014067


Gallus gallus

Features
Gene ID: ENSGALG00000014067
  
Biological name :SGTA
  
Synonyms : SGTA / small glutamine rich tetratricopeptide repeat containing alpha
  
Possible biological names infered from orthology : O43765 / Q8BJU0 / small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 3272391
Gene end: 3281171
  
Corresponding Affymetrix probe sets: Gga.2969.1.S1_at (Chicken Array)   Gga.2969.1.S1_s_at (Chicken Array)   GgaAffx.13121.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050123
Ensembl peptide - ENSGALP00000059849
Ensembl peptide - ENSGALP00000022734
NCBI entrez gene - 426396     See in Manteia.
RefSeq - XM_015299942
RefSeq - NM_001031379
RefSeq - XM_015299939
RefSeq - XM_015299940
RefSeq - XM_015299941
RefSeq Peptide - NP_001026550
swissprot - A0A1L1RM68
swissprot - H9L0E7
swissprot - A0A1D5PBJ5
Ensembl - ENSGALG00000014067
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgtaENSDARG00000019941Danio rerio
 SGTAENSG00000104969Homo sapiens
 SgtaENSMUSG00000004937Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGTB / small glutamine-rich tetratricopeptide repeat-containing protein beta / Q8VD33* / Q96EQ0* / small glutamine rich tetratricopeptide repeat containing beta*ENSGALG0000001476855
ENSGALG0000000783315
STUB1 / Q5ZHY5 / STIP1 homology and U box-containing protein 1 / Q9UNE7* / Q9WUD1*ENSGALG0000004143210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR006636  Heat shock chaperonin-binding
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR032374  SGTA, homodimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:1903070 negative regulation of ER-associated ubiquitin-dependent protein catabolic process IEA
 biological_processGO:1903071 positive regulation of ER-associated ubiquitin-dependent protein catabolic process IEA
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0043621 protein self-association IEA
 molecular_functionGO:1904288 BAT3 complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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