ENSG00000107951


Homo sapiens

Features
Gene ID: ENSG00000107951
  
Biological name :MTPAP
  
Synonyms : mitochondrial poly(A) polymerase / MTPAP / Q9NVV4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: p11.23
Gene start: 30309801
Gene end: 30374448
  
Corresponding Affymetrix probe sets: 218947_s_at (Human Genome U133 Plus 2.0 Array)   222794_x_at (Human Genome U133 Plus 2.0 Array)   229676_at (Human Genome U133 Plus 2.0 Array)   233873_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000263063
Ensembl peptide - ENSP00000394118
Ensembl peptide - ENSP00000404392
NCBI entrez gene - 55149     See in Manteia.
OMIM - 613669
RefSeq - NM_018109
RefSeq Peptide - NP_060579
swissprot - Q5T851
swissprot - Q5T852
swissprot - Q9NVV4
Ensembl - ENSG00000107951
  
Related genetic diseases (OMIM): 613672 - ?Spastic ataxia 4, autosomal recessive, 613672
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mtpapENSDARG00000076155Danio rerio
 MTPAPENSGALG00000007351Gallus gallus
 MtpapENSMUSG00000024234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TUT1 / Q9H6E5 / terminal uridylyl transferase 1, U6 snRNA-specificENSG0000014901628
AP002990.1ENSG0000025550821
Q5TAX3 / ZCCHC11 / zinc finger CCHC-type containing 11ENSG0000013474419
Q5VYS8 / ZCCHC6 / zinc finger CCHC-type containing 6ENSG0000008322318
PAPD4 / Q6PIY7 / poly(A) RNA polymerase D4, non-canonicalENSG0000016432913


Protein motifs (from Interpro)
Interpro ID Name
 IPR002058  PAP/25A-associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006378 mRNA polyadenylation IDA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0071044 histone mRNA catabolic process IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IDA
 molecular_functionGO:0002134 UTP binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004652 polynucleotide adenylyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0030145 manganese ion binding IDA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000182 Movement abnormalities of the tongue 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000712 Emotional lability 
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 HP:0000750 Impaired language development 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002073 Progressive cerebellar ataxia 
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 HP:0002313 Spastic paraparesis 
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 HP:0002359 Frequent falls 
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 HP:0002497 Spastic ataxia 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003677 Slow progression 
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 HP:0006895 Lower limb hypertonia 
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 HP:0007240 Progressive gait ataxia 
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 HP:0200049 Upper limb hypertonia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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