ENSG00000164329


Homo sapiens

Features
Gene ID: ENSG00000164329
  
Biological name :PAPD4
  
Synonyms : PAPD4 / poly(A) RNA polymerase D4, non-canonical / Q6PIY7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q14.1
Gene start: 79612120
Gene end: 79686648
  
Corresponding Affymetrix probe sets: 1556277_a_at (Human Genome U133 Plus 2.0 Array)   225761_at (Human Genome U133 Plus 2.0 Array)   238706_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296783
Ensembl peptide - ENSP00000396861
Ensembl peptide - ENSP00000397563
Ensembl peptide - ENSP00000421966
Ensembl peptide - ENSP00000393412
NCBI entrez gene - 167153     See in Manteia.
OMIM - 614121
RefSeq - XM_017009162
RefSeq - NM_001114393
RefSeq - NM_001114394
RefSeq - NM_001297744
RefSeq - NM_001297745
RefSeq - NM_173797
RefSeq - XM_017009152
RefSeq - XM_017009153
RefSeq - XM_017009154
RefSeq - XM_017009155
RefSeq - XM_017009156
RefSeq - XM_017009157
RefSeq - XM_017009158
RefSeq - XM_017009159
RefSeq - XM_017009160
RefSeq - XM_017009161
RefSeq - XM_011543219
RefSeq - XM_011543220
RefSeq - XM_011543221
RefSeq - XM_011543222
RefSeq - XM_011543223
RefSeq - XM_011543224
RefSeq - XM_011543225
RefSeq - XM_011543226
RefSeq - XM_011543227
RefSeq - XM_011543228
RefSeq - XM_011543229
RefSeq - XM_011543232
RefSeq - XM_017009151
RefSeq Peptide - NP_001107865
RefSeq Peptide - NP_001107866
RefSeq Peptide - NP_001284673
RefSeq Peptide - NP_001284674
RefSeq Peptide - NP_001336481
RefSeq Peptide - NP_001336482
RefSeq Peptide - NP_001336483
RefSeq Peptide - NP_776158
swissprot - Q6PIY7
swissprot - D6RAF2
Ensembl - ENSG00000164329
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 papd4ENSDARG00000099679Danio rerio
 PAPD4ENSGALG00000014810Gallus gallus
 Papd4ENSMUSG00000042167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5VYS8 / ZCCHC6 / zinc finger CCHC-type containing 6ENSG0000008322329
Q5TAX3 / ZCCHC11 / zinc finger CCHC-type containing 11ENSG0000013474428
TUT1 / Q9H6E5 / terminal uridylyl transferase 1, U6 snRNA-specificENSG0000014901619
MTPAP / Q9NVV4 / mitochondrial poly(A) polymeraseENSG0000010795116
AP002990.1ENSG0000025550815


Protein motifs (from Interpro)
Interpro ID Name
 IPR002058  PAP/25A-associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0021766 hippocampus development IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0043631 RNA polyadenylation IDA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0071044 histone mRNA catabolic process IMP
 biological_processGO:1990603 dark adaptation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031380 nuclear RNA-directed RNA polymerase complex IC
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004652 polynucleotide adenylyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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