ENSG00000149016


Homo sapiens

Features
Gene ID: ENSG00000149016
  
Biological name :TUT1
  
Synonyms : Q9H6E5 / terminal uridylyl transferase 1, U6 snRNA-specific / TUT1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q12.3
Gene start: 62575045
Gene end: 62592177
  
Corresponding Affymetrix probe sets: 218965_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419607
Ensembl peptide - ENSP00000420739
Ensembl peptide - ENSP00000419792
Ensembl peptide - ENSP00000278279
Ensembl peptide - ENSP00000308000
NCBI entrez gene - 64852     See in Manteia.
OMIM - 610641
RefSeq - NM_022830
RefSeq Peptide - NP_073741
swissprot - F5H0R1
swissprot - F8WA97
swissprot - J3KN81
swissprot - C9JBX0
swissprot - Q9H6E5
swissprot - A0A0A8K9B1
Ensembl - ENSG00000149016
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tut1ENSDARG00000057321Danio rerio
 Tut1ENSMUSG00000071645Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP002990.1ENSG0000025550856
MTPAP / Q9NVV4 / mitochondrial poly(A) polymeraseENSG0000010795118
Q5VYS8 / ZCCHC6 / zinc finger CCHC-type containing 6ENSG0000008322317
Q5TAX3 / ZCCHC11 / zinc finger CCHC-type containing 11ENSG0000013474416
PAPD4 / Q6PIY7 / poly(A) RNA polymerase D4, non-canonicalENSG0000016432910


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002058  PAP/25A-associated
 IPR034388  Star-PAP, RNA recognition motif
 IPR034389  Speckle targeted PIP5K1A-regulated poly(A) polymerase
 IPR035979  RNA-binding domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0016180 snRNA processing IMP
 biological_processGO:0098789 pre-mRNA cleavage required for polyadenylation IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IDA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0004652 polynucleotide adenylyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050265 RNA uridylyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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