ENSMUSG00000071645


Mus musculus

Features
Gene ID: ENSMUSG00000071645
  
Biological name :Tut1
  
Synonyms : Q8R3F9 / terminal uridylyl transferase 1, U6 snRNA-specific / Tut1
  
Possible biological names infered from orthology : AP002990.1 / Q9H6E5
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: A
Gene start: 8953850
Gene end: 8966207
  
Corresponding Affymetrix probe sets: 10461354 (MoGene1.0st)   1440395_at (Mouse Genome 430 2.0 Array)   1451106_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000093958
NCBI entrez gene - 70044     See in Manteia.
MGI - MGI:1917294
RefSeq - NM_197993
RefSeq Peptide - NP_932110
swissprot - Q8R3F9
Ensembl - ENSMUSG00000071645
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tut1ENSDARG00000057321Danio rerio
 AP002990.1ENSG00000255508Homo sapiens
 TUT1ENSG00000149016Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mtpap / Q9D0D3 / Poly(A) RNA polymerase, mitochondrial / Q9NVV4* / mitochondrial poly(A) polymerase*ENSMUSG0000002423418
Zcchc6 / zinc finger, CCHC domain containing 6 / Q5VYS8* / zinc finger CCHC-type containing 6*ENSMUSG0000003524816
B2RX14 / Zcchc11 / zinc finger, CCHC domain containing 11 / Q5TAX3* / zinc finger CCHC-type containing 11*ENSMUSG0000003461016
Papd4 / Q91YI6 / PAP associated domain containing 4 / Q6PIY7* / poly(A) RNA polymerase D4, non-canonical*ENSMUSG0000004216710


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002058  PAP/25A-associated
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR034388  Star-PAP, RNA recognition motif
 IPR034389  Speckle targeted PIP5K1A-regulated poly(A) polymerase
 IPR035979  RNA-binding domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation ISS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0016180 snRNA processing ISS
 biological_processGO:0098789 pre-mRNA cleavage required for polyadenylation ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex ISO
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding ISO
 molecular_functionGO:0003730 mRNA 3"-UTR binding ISO
 molecular_functionGO:0004652 polynucleotide adenylyltransferase activity ISO
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0019899 enzyme binding ISO
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050265 RNA uridylyltransferase activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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