ENSG00000111729


Homo sapiens

Features
Gene ID: ENSG00000111729
  
Biological name :CLEC4A
  
Synonyms : CLEC4A / C-type lectin domain family 4 member A / Q9UMR7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p13.31
Gene start: 8123632
Gene end: 8138607
  
Corresponding Affymetrix probe sets: 219947_at (Human Genome U133 Plus 2.0 Array)   221724_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000229332
Ensembl peptide - ENSP00000344646
Ensembl peptide - ENSP00000353690
Ensembl peptide - ENSP00000493257
Ensembl peptide - ENSP00000247243
NCBI entrez gene - 50856     See in Manteia.
OMIM - 605306
RefSeq - XM_017019382
RefSeq - NM_016184
RefSeq - NM_194447
RefSeq - NM_194448
RefSeq - NM_194450
RefSeq - XM_011520684
RefSeq Peptide - NP_919429
RefSeq Peptide - NP_919430
RefSeq Peptide - NP_919432
RefSeq Peptide - NP_057268
swissprot - Q9UMR7
swissprot - A0A286YF15
Ensembl - ENSG00000111729
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 illr1ENSDARG00000059254Danio rerio
 illr2ENSDARG00000094882Danio rerio
 illr3ENSDARG00000018327Danio rerio
 illr4ENSDARG00000008075Danio rerio
 si:ch211-133n4.11ENSDARG00000094796Danio rerio
 si:ch211-133n4.12ENSDARG00000092749Danio rerio
 si:ch211-133n4.7ENSDARG00000095424Danio rerio
 si:ch211-232p21.6ENSDARG00000089377Danio rerio
 si:ch73-86n18.1ENSDARG00000056379Danio rerio
 Clec4a1ENSMUSG00000049037Mus musculus
 Clec4a3ENSMUSG00000043832Mus musculus
 Clec4a4ENSMUSG00000059639Mus musculus
 Clec4b1ENSMUSG00000030147Mus musculus
 Clec4b2ENSMUSG00000067767Mus musculus
 Q9QZ15ENSMUSG00000030148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLEC4C / Q8WTT0 / C-type lectin domain family 4 member CENSG0000019817841
CLEC6A / Q6EIG7 / C-type lectin domain containing 6AENSG0000020584635
CLEC4D / Q8WXI8 / C-type lectin domain family 4 member DENSG0000016652729


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR033989  CD209-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002223 stimulatory C-type lectin receptor signaling pathway TAS
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007166 cell surface receptor signaling pathway TAS
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity TAS
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
Dectin-2 family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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