ENSMUSG00000030147


Mus musculus

Features
Gene ID: ENSMUSG00000030147
  
Biological name :Clec4b1
  
Synonyms : Clec4b1 / C-type lectin domain family 4, member b1
  
Possible biological names infered from orthology : CLEC4A / C-type lectin domain family 4 member A / Q9UMR7
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: F2
Gene start: 123049962
Gene end: 123071555
  
Corresponding Affymetrix probe sets: 10541581 (MoGene1.0st)   1421685_at (Mouse Genome 430 2.0 Array)   1425407_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000076466
Ensembl peptide - ENSMUSP00000077636
NCBI entrez gene - 69810     See in Manteia.
MGI - MGI:1917060
RefSeq - XM_006506570
RefSeq - NM_001190310
RefSeq - NM_027218
RefSeq Peptide - NP_081494
RefSeq Peptide - NP_001177239
swissprot - Q7TS58
swissprot - Q9D8Q7
Ensembl - ENSMUSG00000030147
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 illr1ENSDARG00000059254Danio rerio
 illr2ENSDARG00000094882Danio rerio
 illr3ENSDARG00000018327Danio rerio
 illr4ENSDARG00000008075Danio rerio
 si:ch211-133n4.11ENSDARG00000094796Danio rerio
 si:ch211-133n4.12ENSDARG00000092749Danio rerio
 si:ch211-133n4.7ENSDARG00000095424Danio rerio
 si:ch211-232p21.6ENSDARG00000089377Danio rerio
 si:ch73-86n18.1ENSDARG00000056379Danio rerio
 CLEC4AENSG00000111729Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Clec4b2 / C-type lectin domain family 4, member b2 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000006776766
Q9QZ15 / Clec4a2 / C-type lectin domain family 4 member A / CLEC4A* / Q9UMR7*ENSMUSG0000003014864
Clec4n / Q9JKF4 / C-type lectin domain family 6 member A / Q6EIG7* / CLEC6A* / C-type lectin domain containing 6A*ENSMUSG0000002334958
Clec4a3 / C-type lectin domain family 4, member a3 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000004383251
Clec4a4 / C-type lectin domain family 4, member a4 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000005963946
Clec4a1 / C-type lectin domain family 4, member a1 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000004903742
Clec4d / Q9Z2H6 / C-type lectin domain family 4 member D / Q8WXI8*ENSMUSG0000003014435


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR033989  CD209-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051281 positive regulation of release of sequestered calcium ion into cytosol IDA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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