ENSMUSG00000059639


Mus musculus

Features
Gene ID: ENSMUSG00000059639
  
Biological name :Clec4a4
  
Synonyms : Clec4a4 / C-type lectin domain family 4, member a4
  
Possible biological names infered from orthology : CLEC4A / C-type lectin domain family 4 member A / Q9UMR7
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: F2
Gene start: 122990367
Gene end: 123024105
  
Corresponding Affymetrix probe sets: 10541575 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000078351
NCBI entrez gene - 474145     See in Manteia.
MGI - MGI:3624119
RefSeq - NM_001005860
RefSeq Peptide - NP_001005860
swissprot - Q5YIR8
Ensembl - ENSMUSG00000059639
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 illr1ENSDARG00000059254Danio rerio
 illr2ENSDARG00000094882Danio rerio
 illr3ENSDARG00000018327Danio rerio
 illr4ENSDARG00000008075Danio rerio
 si:ch211-133n4.11ENSDARG00000094796Danio rerio
 si:ch211-133n4.12ENSDARG00000092749Danio rerio
 si:ch211-133n4.7ENSDARG00000095424Danio rerio
 si:ch211-232p21.6ENSDARG00000089377Danio rerio
 si:ch73-86n18.1ENSDARG00000056379Danio rerio
 CLEC4AENSG00000111729Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9QZ15 / Clec4a2 / C-type lectin domain family 4 member A / CLEC4A* / Q9UMR7*ENSMUSG0000003014869
Clec4a3 / C-type lectin domain family 4, member a3 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000004383258
Clec4a1 / C-type lectin domain family 4, member a1 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000004903748
Clec4b2 / C-type lectin domain family 4, member b2 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000006776747
Clec4b1 / C-type lectin domain family 4, member b1 / CLEC4A* / Q9UMR7* / C-type lectin domain family 4 member A*ENSMUSG0000003014741
Clec4n / Q9JKF4 / C-type lectin domain family 6 member A / Q6EIG7* / CLEC6A* / C-type lectin domain containing 6A*ENSMUSG0000002334934
Clec4d / Q9Z2H6 / C-type lectin domain family 4 member D / Q8WXI8*ENSMUSG0000003014428


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR033989  CD209-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0097367 carbohydrate derivative binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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