ENSG00000112081


Homo sapiens

Features
Gene ID: ENSG00000112081
  
Biological name :SRSF3
  
Synonyms : P84103 / serine and arginine rich splicing factor 3 / SRSF3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p21.31
Gene start: 36594353
Gene end: 36605600
  
Corresponding Affymetrix probe sets: 202899_s_at (Human Genome U133 Plus 2.0 Array)   208672_s_at (Human Genome U133 Plus 2.0 Array)   208673_s_at (Human Genome U133 Plus 2.0 Array)   232392_at (Human Genome U133 Plus 2.0 Array)   235324_at (Human Genome U133 Plus 2.0 Array)   237485_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000436036
Ensembl peptide - ENSP00000484891
Ensembl peptide - ENSP00000482833
Ensembl peptide - ENSP00000362820
NCBI entrez gene - 6428     See in Manteia.
OMIM - 603364
RefSeq - NM_003017
RefSeq Peptide - NP_003008
swissprot - B2R6F3
swissprot - A0A087X2D0
swissprot - P84103
Ensembl - ENSG00000112081
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf3aENSDARG00000100815Danio rerio
 srsf3aENSDARG00000025397Danio rerio
 srsf3bENSDARG00000059360Danio rerio
 SRSF3ENSGALG00000000533Gallus gallus
 Srsf3ENSMUSG00000071172Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRSF7 / Q16629 / serine and arginine rich splicing factor 7ENSG0000011587555


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0048024 regulation of mRNA splicing, via spliceosome IDA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043274 phospholipase binding IEA
 molecular_functionGO:1990825 sequence-specific mRNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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