ENSG00000115875


Homo sapiens

Features
Gene ID: ENSG00000115875
  
Biological name :SRSF7
  
Synonyms : Q16629 / serine and arginine rich splicing factor 7 / SRSF7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p22.1
Gene start: 38743599
Gene end: 38751494
  
Corresponding Affymetrix probe sets: 201129_at (Human Genome U133 Plus 2.0 Array)   211439_at (Human Genome U133 Plus 2.0 Array)   213649_at (Human Genome U133 Plus 2.0 Array)   214141_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000402264
Ensembl peptide - ENSP00000402544
Ensembl peptide - ENSP00000416516
Ensembl peptide - ENSP00000408868
Ensembl peptide - ENSP00000325905
Ensembl peptide - ENSP00000386806
Ensembl peptide - ENSP00000392300
Ensembl peptide - ENSP00000398159
Ensembl peptide - ENSP00000400246
Ensembl peptide - ENSP00000401202
NCBI entrez gene - 6432     See in Manteia.
OMIM - 600572
RefSeq - XM_005264485
RefSeq - NM_001031684
RefSeq - NM_001195446
RefSeq - XM_005264484
RefSeq Peptide - NP_001182375
RefSeq Peptide - NP_001026854
swissprot - C9JAB2
swissprot - A0A0B4J1Z1
swissprot - F8WEA1
swissprot - H7C1N1
swissprot - H7BZZ6
swissprot - Q16629
Ensembl - ENSG00000115875
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf7bENSDARG00000101057Danio rerio
 ENSGALG00000038528Gallus gallus
 SRSF7ENSGALG00000033120Gallus gallus
 Srsf7ENSMUSG00000024097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRSF3 / P84103 / serine and arginine rich splicing factor 3ENSG0000011208138


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001878  Zinc finger, CCHC-type
 IPR034651  SRSF7, RNA recognition motif
 IPR035979  RNA-binding domain superfamily
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006397 mRNA processing TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0008380 RNA splicing IDA
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IDA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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