ENSGALG00000033120


Gallus gallus

Features
Gene ID: ENSGALG00000033120
  
Biological name :SRSF7
  
Synonyms : SRSF7
  
Possible biological names infered from orthology : Q16629 / Q8BL97 / serine and arginine rich splicing factor 7 / serine/arginine-rich splicing factor 7
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 16548410
Gene end: 16555753
  
Corresponding Affymetrix probe sets: Gga.9040.1.S1_s_at (Chicken Array)   GgaAffx.24428.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044308
Ensembl peptide - ENSGALP00000064215
Ensembl peptide - ENSGALP00000054167
Ensembl peptide - ENSGALP00000047530
NCBI entrez gene - 426265     See in Manteia.
RefSeq - NM_001031368
RefSeq - XM_015283521
RefSeq Peptide - NP_001026539
swissprot - A0A1D5NVD4
swissprot - A0A1L1RZD1
swissprot - Q5ZMI0
swissprot - A0A1D5PMT0
Ensembl - ENSGALG00000033120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf7bENSDARG00000101057Danio rerio
 SRSF7ENSG00000115875Homo sapiens
 Srsf7ENSMUSG00000024097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRSF7* / Q16629* / Q8BL97* / serine/arginine-rich splicing factor 7* / serine and arginine rich splicing factor 7*ENSGALG0000003852895
SRSF3 / serine and arginine rich splicing factor 3 / P84104* / P84103* / Gm12355* / serine/arginine-rich splicing factor 3*ENSGALG0000000053337


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001878  Zinc finger, CCHC-type
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr